RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MGRN1O60291 552 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 CSTAP01040 98 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 TRBC1P01850 177 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 FGGP02679 453 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 SERPINE2P07093 398 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 TCN1P20061 433 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 BCKDHBP21953 392 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 CXCR2P25025 360 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 BCAP31P51572 246 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 RAP1BP61224 184 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 RAD51Q06609 339 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF763Q0D2J5 394 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 FCN2Q15485 313 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 C14orf177Q52M58 125 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 PPM1LQ5SGD2 360 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 C1orf146Q5VVC0 180 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 STUMQ69YW2 141 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 C1orf94Q6P1W5 598 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 TTC23LQ6PF05 361 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 TFAP2EQ6VUC0 442 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF571Q7Z3V5 609 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 LHFPL3Q86UP9 236 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF589Q86UQ0 364 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 EID2Q8N6I1 236 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 KLHL30-AS1Q8NEE0 82 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 PROKR2Q8NFJ6 384 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 MITD1Q8WV92 249 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 CAPSLQ8WWF8 208 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 OR1E3Q8WZA6 343 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 FGF14Q92915 247 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 KIAA1143Q96AT1 154 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 JSRP1Q96MG2 331 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 SMIM14Q96QK8 99 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 PELOQ9BRX2 385 aaKnown RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 STMN4Q9H169 189 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-211ENST00000484581 NTN4Q9HB63 628 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 PXMP2Q9NR77 195 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 UGT2A1Q9Y4X1 527 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
VPS13A-211ENST00000484581 AKNAQ7Z591 1439 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 KIF27Q86VH2 1401 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 M0R3G1 203 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 PES1O00541 588 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 MRPS12O15235 138 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 EIF4E2O60573 245 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SERF1AO75920 110 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CLPXO76031 633 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SNAPINO95295 136 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 IGHV3-48P01763 117 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 IGHV3-23P01764 117 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 IVLP07476 585 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF883P0CG24 379 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 UBCP0CG48 685 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CCDC166P0CW27 439 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CAPN2P17655 700 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SLC2A5P22732 501 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 FASP25445 335 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 GLP1RP43220 463 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 BTDP43251 543 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 NPBWR2P48146 333 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ARRB1P49407 418 aaPredicted RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 UGT2B15P54855 530 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SELENOTP62341 195 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ADARB1P78563 741 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SF3A2Q15428 464 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ATP6AP1Q15904 470 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 GSG1Q2KHT4 349 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 PGGHGQ32M88 737 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 FBXO48Q5FWF7 155 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SOHLH1Q5JUK2 328 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 C1orf100Q5SVJ3 147 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF658Q5TYW1 1059 aaPredicted RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 C16orf87Q6PH81 154 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 APRG1Q8IVJ8 170 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 PUSL1Q8N0Z8 303 aaKnown RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 C6orf223Q8N319 242 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 JAGN1Q8N5M9 183 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 TTC29Q8NA56 475 aaPredicted RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ACOT11Q8WXI4 607 aaPredicted RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 NEIL2Q969S2 332 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 SLC25A38Q96DW6 304 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 C19orf60Q96EN9 201 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CERS2Q96G23 380 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 OPALINQ96PE5 141 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CNPY3Q9BT09 278 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 NAT9Q9BTE0 207 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 HAUS4Q9H6D7 363 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 CWH43Q9H720 699 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 ZNF702PQ9H963 129 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 IL26Q9NPH9 171 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 STOX2Q9P2F5 926 aaPredicted RBP3.38□□□□□ -1.87
VPS13A-211ENST00000484581 BTNL2Q9UIR0 455 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 TRAF3IP3Q9Y228 551 aa3.38□□□□□ -1.87
VPS13A-211ENST00000484581 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RBMY1BA6NDE4 496 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 RBMY1EA6NEQ0 496 aaKnown RBP3.37□□□□□ -1.87
VPS13A-211ENST00000484581 M0QX08 132 aa3.37□□□□□ -1.87
VPS13A-211ENST00000484581 NDUFS8O00217 210 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms