RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 B4GALT1P15291 398 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 GZMKP49863 264 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 PIGFQ07326 219 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 IQCCQ4KMZ1 466 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 SWT1Q5T5J6 900 aaKnown RBP18.65■□□□□ 0.58
USP40-215ENST00000484528 NHLRC1Q6VVB1 395 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 WDR88Q6ZMY6 472 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 IL17RELQ6ZVW7 336 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 OR4D11Q8NGI4 311 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 OR6T1Q8NGN1 323 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 ULBP2Q9BZM5 246 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 BPESC1Q9GZL8 116 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 ZNF385DQ9H6B1 395 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 NPHS2Q9NP85 383 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 B3GAT2Q9NPZ5 323 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 POFUT2Q9Y2G5 429 aa18.65■□□□□ 0.58
USP40-215ENST00000484528 ZNF726A6NNF4 738 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 PLPP3O14495 311 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 LMX1BO60663 402 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 ADORA3P0DMS8 318 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 IGFBP5P24593 272 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 NFYCQ13952 458 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 DAG1Q14118 895 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 PHC2Q8IXK0 858 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 CDK20Q8IZL9 346 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 CKAP2Q8WWK9 683 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 MSI2Q96DH6 328 aaKnown RBP18.64■□□□□ 0.57
USP40-215ENST00000484528 SHARPINQ9H0F6 387 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 RAB1BQ9H0U4 201 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 DYNLRB1Q9NP97 96 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 MYOZ1Q9NP98 299 aaPredicted RBP18.64■□□□□ 0.57
USP40-215ENST00000484528 B3GNT2Q9NY97 397 aa18.64■□□□□ 0.57
USP40-215ENST00000484528 LOC100289279A0A1B0GTE1 492 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 TMEM129A0AVI4 362 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 KPNA4O00629 521 aaPredicted RBP18.63■□□□□ 0.57
USP40-215ENST00000484528 PHF1O43189 567 aaPredicted RBP18.63■□□□□ 0.57
USP40-215ENST00000484528 CHP2O43745 196 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 THY1P04216 161 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 BIDP55957 195 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 RBBP4Q09028 425 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 GSG1Q2KHT4 349 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 ENTPD8Q5MY95 495 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 ZNF613Q6PF04 617 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 TSPYL5Q86VY4 417 aaPredicted RBP18.63■□□□□ 0.57
USP40-215ENST00000484528 CCDC36Q8IYA8 594 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 DPP10Q8N608 796 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 OR5J2Q8NH18 312 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 LRR1Q96L50 414 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 MAGEB18Q96M61 343 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 DOK1Q99704 481 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 TMEM160Q9NX00 188 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 KCNS2Q9ULS6 477 aa18.63■□□□□ 0.57
USP40-215ENST00000484528 FMO6PO60774 539 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 LYPD3O95274 346 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 DAOP14920 347 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 IFNGR1P15260 489 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 CD247P20963 164 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 PTDSS1P48651 473 aaKnown RBP18.62■□□□□ 0.57
USP40-215ENST00000484528 CSNK1A1P48729 337 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 MSMPQ1L6U9 139 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 FAM166AQ6J272 317 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 PXKQ7Z7A4 578 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 ADAMTS16Q8TE57 1224 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 TAMM41Q96BW9 452 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 FOXB1Q99853 325 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 TPK1Q9H3S4 243 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 EVA1AQ9H8M9 152 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 ZNF224Q9NZL3 707 aa18.62■□□□□ 0.57
USP40-215ENST00000484528 A0A0G2JND7 137 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 LRP5LA4QPB2 252 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 VSTM5A8MXK1 200 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 HMGB1P1B2RPK0 211 aaPredicted RBP18.61■□□□□ 0.57
USP40-215ENST00000484528 OR6A2O95222 327 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 STAMBPO95630 424 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 CH25HO95992 272 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 MT-ATP6P00846 226 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 IGFBP1P08833 259 aaPredicted RBP18.61■□□□□ 0.57
USP40-215ENST00000484528 ADRA2AP08913 450 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 GIPRP48546 466 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 MELKQ14680 651 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 LINC00114Q6XXX2 140 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 LRRC17Q8N6Y2 441 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 OR10A6Q8NH74 314 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 SOX7Q9BT81 388 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 KAT8Q9H7Z6 458 aaKnown RBP18.61■□□□□ 0.57
USP40-215ENST00000484528 LPAR3Q9UBY5 353 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 SLC7A7Q9UM01 511 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 TRIM33Q9UPN9 1127 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 CMAHPQ9Y471 501 aa18.61■□□□□ 0.57
USP40-215ENST00000484528 EDF1O60869 148 aaKnown RBP18.6■□□□□ 0.57
USP40-215ENST00000484528 PATE4P0C8F1 98 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 ZNF14P17017 642 aaPredicted RBP18.6■□□□□ 0.57
USP40-215ENST00000484528 ZNF23P17027 643 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 NR4A1P22736 598 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 PCGF2P35227 344 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 ZNF74Q16587 644 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 SLC35D2Q76EJ3 337 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 ZNF627Q7L945 461 aa18.6■□□□□ 0.57
USP40-215ENST00000484528 PATL1Q86TB9 770 aaKnown RBP18.6■□□□□ 0.57
USP40-215ENST00000484528 IL17RDQ8NFM7 739 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms