RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR6S1Q8NH40 331 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 SLC41A3Q96GZ6 507 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 MCHR1Q99705 422 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 ULBP2Q9BZM5 246 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 BPESC1Q9GZL8 116 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 NOX3Q9HBY0 568 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 POFUT2Q9Y2G5 429 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 NOX1Q9Y5S8 564 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 STAB1Q9NY15 2570 aa13.2□□□□□ -0.3
LIMS3-203ENST00000480744 MFN2O95140 757 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 DAOP14920 347 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 B4GALT1P15291 398 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 IGFBP5P24593 272 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 GUCY1A3Q02108 690 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 CGB2Q6NT52 195 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 DLEU7Q6UYE1 221 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 CDK20Q8IZL9 346 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 C11orf65Q8NCR3 313 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 IL17RDQ8NFM7 739 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
LIMS3-203ENST00000480744 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
LIMS3-203ENST00000480744 MRPL39Q9NYK5 338 aaKnown RBP13.19□□□□□ -0.3
LIMS3-203ENST00000480744 LEF1Q9UJU2 399 aaPredicted RBP13.19□□□□□ -0.3
LIMS3-203ENST00000480744 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
LIMS3-203ENST00000480744 CPSF4LA6NMK7 179 aaKnown RBP13.18□□□□□ -0.3
LIMS3-203ENST00000480744 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 PLPP3O14495 311 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 ANGPT2O15123 496 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 OR6A2O95222 327 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 STAMBPO95630 424 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 TGFAP01135 160 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 ZNF23P17027 643 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 SRD5A1P18405 259 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 CSNK1A1P48729 337 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 MTPNP58546 118 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 SELPLGQ14242 412 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 SWT1Q5T5J6 900 aaKnown RBP13.18□□□□□ -0.3
LIMS3-203ENST00000480744 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 VANGL1Q8TAA9 524 aaPredicted RBP13.18□□□□□ -0.3
LIMS3-203ENST00000480744 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
LIMS3-203ENST00000480744 LRR1Q96L50 414 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 DOK1Q99704 481 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 EVA1AQ9H8M9 152 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 CMAHPQ9Y471 501 aa13.18□□□□□ -0.3
LIMS3-203ENST00000480744 LRP5LA4QPB2 252 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 M0QX08 132 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 RAB36O95755 333 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 ADRA2AP08913 450 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 HNF1AP20823 631 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 PTDSS1P48651 473 aaKnown RBP13.17□□□□□ -0.3
LIMS3-203ENST00000480744 BIDP55957 195 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
LIMS3-203ENST00000480744 DUSP7Q16829 419 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 ZNF613Q6PF04 617 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 PXKQ7Z7A4 578 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 CGREF1Q99674 301 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 ARHGDIGQ99819 225 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 FOXB1Q99853 325 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 B3GNT2Q9NY97 397 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
LIMS3-203ENST00000480744 TMEM129A0AVI4 362 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 KPNA4O00629 521 aaPredicted RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 CHP2O43745 196 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 FMO6PO60774 539 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 CH25HO95992 272 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 MT-ATP6P00846 226 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 IFNGR1P15260 489 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 NR4A1P22736 598 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 GIPRP48546 466 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 RBBP4Q09028 425 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 NFYCQ13952 458 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 NPTX1Q15818 432 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 TRMT5Q32P41 509 aaKnown RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 ENTPD8Q5MY95 495 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 TTC33Q6PID6 262 aaPredicted RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 SLC26A7Q8TE54 656 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 UBASH3BQ8TF42 649 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
LIMS3-203ENST00000480744 MRPL37Q9BZE1 423 aaKnown RBP13.16□□□□□ -0.3
LIMS3-203ENST00000480744 CCDC134Q9H6E4 229 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms