RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CCDC22O60826 627 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 CRLF1O75462 422 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 OR5F1O95221 314 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 IGHG1P01857 330 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 OPN1SWP03999 348 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 UMPSP11172 480 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 NPR2P20594 1047 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 PCSK6P29122 969 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 TAS2R41P59536 307 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 VLDLRP98155 873 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 TAF11Q15544 211 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 MS4A18Q3C1V0 323 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 ANKDD1AQ495B1 522 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 B3GLCTQ6Y288 498 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 ZNF813Q6ZN06 617 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 KDM8Q8N371 416 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 NEU4Q8WWR8 484 aaPredicted RBP9.96□□□□□ -0.82
CCM2-213ENST00000480658 FBXO17Q96EF6 278 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 TNFRSF13CQ96RJ3 184 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 FOXB1Q99853 325 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 PLK3Q9H4B4 646 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 GPR160Q9UJ42 338 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 GDF2Q9UK05 429 aaPredicted RBP9.96□□□□□ -0.82
CCM2-213ENST00000480658 CDC42EP3Q9UKI2 254 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 SLC7A7Q9UM01 511 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 ARID1AO14497 2285 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 ACANP16112 2415 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 A8MV72 311 aaPredicted RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 FAM220BPB1ANY3 271 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 MCIDASD6RGH6 385 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 MT-ND1P03886 318 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 OR4A8P0C604 315 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 OR8G3PP0DMU2 310 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 USF1P22415 310 aaPredicted RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 ZNF84P51523 738 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 IDH3GP51553 393 aaPredicted RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 SELENOVP59797 346 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 ST3GAL3Q11203 375 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 NPRL3Q12980 569 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 CAMK2DQ13557 499 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 DAG1Q14118 895 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SLC36A2Q495M3 483 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 FAM205BPQ63HN1 556 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SLC35D2Q76EJ3 337 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 LINGO2Q7L985 606 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 COMTD1Q86VU5 262 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 C1orf174Q8IYL3 243 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 OR2T12Q8NG77 320 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 RP9Q8TA86 221 aaKnown RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 VANGL1Q8TAA9 524 aaPredicted RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 TAMM41Q96BW9 452 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 THOC1Q96FV9 657 aaKnown RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 MOGAT1Q96PD6 335 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 HOPXQ9BPY8 73 aaPredicted RBP9.95□□□□□ -0.82
CCM2-213ENST00000480658 LRMDAQ9H2I8 198 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 NELFAQ9H3P2 528 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SMURF2Q9HAU4 748 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 FGFR1OP2Q9NVK5 253 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SEC14L4Q9UDX3 406 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SLC7A8Q9UHI5 535 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 SH3GLB1Q9Y371 365 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 CMAHPQ9Y471 501 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 FREM1Q5H8C1 2179 aa9.95□□□□□ -0.82
CCM2-213ENST00000480658 HIVEP2P31629 2446 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 IGHV2OR16-5A0A0B4J2B6 119 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 ELOVL7A1L3X0 281 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 TPST2O60704 377 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CH25HO95992 272 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 BCL10O95999 233 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 ASAH2BP0C7U1 165 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CD79AP11912 226 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 IFNGR1P15260 489 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 HNF1AP20823 631 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 GZMKP49863 264 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 BIDP55957 195 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CLRN1P58418 232 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 KLF10Q13118 480 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 SELPLGQ14242 412 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 ADIPOQQ15848 244 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 TMEM249Q2WGJ8 235 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CHRFAM7AQ494W8 412 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CARD17Q5XLA6 110 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 TMEM53Q6P2H8 277 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 PODNL1Q6PEZ8 512 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 MDP1Q86V88 176 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CARM1Q86X55 608 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 CALHM3Q86XJ0 350 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 ZNF525Q8N782 197 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 GPR32P1Q8NGA4 272 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 OR1J2Q8NGS2 313 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 LIPHQ8WWY8 451 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 KCNN2Q9H2S1 579 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 DYNLRB1Q9NP97 96 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 SAR1AQ9NR31 198 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 MED29Q9NX70 200 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 GLTPQ9NZD2 209 aa9.94□□□□□ -0.82
CCM2-213ENST00000480658 ZNF346Q9UL40 294 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms