RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 LINC00114Q6XXX2 140 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 SLC35D2Q76EJ3 337 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 CALHM3Q86XJ0 350 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 TMEM123Q8N131 208 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 POU5F2Q8N7G0 328 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 OR4D11Q8NGI4 311 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 RP9Q8TA86 221 aaKnown RBP13.36□□□□□ -0.27
CDK9-203ENST00000480353 HTRA1Q92743 480 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 RCN3Q96D15 328 aa13.36□□□□□ -0.27
CDK9-203ENST00000480353 VRK1Q99986 396 aaPredicted RBP13.36□□□□□ -0.27
CDK9-203ENST00000480353 POLR2J2Q9GZM3 115 aaKnown RBP13.36□□□□□ -0.27
CDK9-203ENST00000480353 POLR2J3Q9H1A7 115 aaKnown RBP13.36□□□□□ -0.27
CDK9-203ENST00000480353 A0A1W2PRG6 482 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 H7C417 338 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 FXYD1O00168 92 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
CDK9-203ENST00000480353 RAB36O95755 333 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 ERCC1P07992 297 aaPredicted RBP13.35□□□□□ -0.27
CDK9-203ENST00000480353 B4GALT1P15291 398 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 TNFRSF1BP20333 461 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 LSP1P33241 339 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 SERPINF1P36955 418 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 CYBRD1Q53TN4 286 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 WDR88Q6ZMY6 472 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 MDP1Q86V88 176 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 MICU2Q8IYU8 434 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 FAM169BQ8N8A8 192 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 IL17RDQ8NFM7 739 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 ZNF566Q969W8 418 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 ZNF837Q96EG3 531 aaPredicted RBP13.35□□□□□ -0.27
CDK9-203ENST00000480353 ZNF583Q96ND8 569 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 PCDHAC1Q9H158 963 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 CA10Q9NS85 328 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
CDK9-203ENST00000480353 OR5F1O95221 314 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 FARS2O95363 451 aaKnown RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 BCL10O95999 233 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 IGKV3-15P01624 115 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 MT-ND1P03886 318 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 CSF3P09919 207 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 COX4I1P13073 169 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 KDELR2P33947 212 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 RBM34P42696 430 aaKnown RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 OR1E2P47887 323 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 PTDSS1P48651 473 aaKnown RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 EFNA4P52798 201 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 CLRN1P58418 232 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 PIGFQ07326 219 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 ZP4Q12836 540 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 MELKQ14680 651 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 CARTPTQ16568 116 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 KRTAP21-3Q3LHN1 58 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 PHYHD1Q5SRE7 291 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 HDDC2Q7Z4H3 204 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 FAM168AQ92567 244 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 FOXB1Q99853 325 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 CRNNQ9UBG3 495 aaPredicted RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 RIMS3Q9UJD0 308 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 FBXO9Q9UK97 447 aaPredicted RBP13.34□□□□□ -0.27
CDK9-203ENST00000480353 MED31Q9Y3C7 131 aa13.34□□□□□ -0.27
CDK9-203ENST00000480353 B9A039 149 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 NDUFAB1O14561 156 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 UBL3O95164 117 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 ZNF682O95780 498 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 IGLV1-44P01699 117 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 IGHG1P01857 330 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 HLA-HP01893 362 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 CELA3BP08861 270 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 OR4A8P0C604 315 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 FUT1P19526 365 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 GALK2Q01415 458 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 PIN1Q13526 163 aaPredicted RBP13.33□□□□□ -0.28
CDK9-203ENST00000480353 DAG1Q14118 895 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
CDK9-203ENST00000480353 LRRC17Q8N6Y2 441 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 ZNF525Q8N782 197 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 TMEM239Q8WW34 195 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
CDK9-203ENST00000480353 FAM107BQ9H098 131 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 EFCAB1Q9HAE3 211 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 TAS2R5Q9NYW4 299 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 GLTPQ9NZD2 209 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 FBXL3Q9UKT7 428 aa13.33□□□□□ -0.28
CDK9-203ENST00000480353 CR1P17927 2039 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 GMNNO75496 209 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 PDE5AO76074 875 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 OR7A10O76100 309 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 THY1P04216 161 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 THRBP10828 461 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 SLC25A16P16260 332 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 NPR2P20594 1047 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 CALCRP30988 508 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 PDLIM4P50479 330 aa13.32□□□□□ -0.28
CDK9-203ENST00000480353 NUDT2P50583 147 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms