RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CELSR3Q9NYQ7 3312 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 SPAG17Q6Q759 2223 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 TRAV8-7A0A075B6U6 113 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 SCDO00767 359 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ZNF264O43296 627 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ZNF749O43361 778 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 HCRTR2O43614 444 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 KHDRBS3O75525 346 aaKnown RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 PPM1BO75688 479 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CD14P08571 375 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 FREM3P0C091 2139 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 DPP4P27487 766 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 RAD52P43351 418 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 BLKP51451 505 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 HSD17B7P56937 341 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 UBE2MP61081 183 aaKnown RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 CAMK2DQ13557 499 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.81□□□□□ -0.84
VPS52-217ENST00000478934 TOR2AQ5JU69 321 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ZNF767PQ75MW2 155 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 SLC35D2Q76EJ3 337 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 LUZP2Q86TE4 346 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 KDM8Q8N371 416 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 FAM71CQ8NEG0 241 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OR6N2Q8NGY6 317 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 SYNPRQ8TBG9 265 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 THEM6Q8WUY1 208 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 GPR137Q96N19 417 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 NPAS1Q99742 590 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 HRASLSQ9HDD0 168 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CA10Q9NS85 328 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OR5V1Q9UGF6 321 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CA14Q9ULX7 337 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CAMK2AQ9UQM7 478 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 HIF3AQ9Y2N7 669 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 COL4A2P08572 1712 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 IGHV3-20A0A0C4DH32 117 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 TMEM150CB9EJG8 249 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 TEX46H3BTG2 121 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 SLC22A5O76082 557 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 NUDT14O95848 222 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ASAH2BP0C7U1 165 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ZNF250P15622 560 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 CENPAP49450 140 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 CCR9P51686 369 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 NR0B1P51843 470 aaKnown RBP9.8□□□□□ -0.84
VPS52-217ENST00000478934 CFHR1Q03591 330 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ETFDHQ16134 617 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 UBE2NLQ5JXB2 153 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 YOD1Q5VVQ6 348 aaPredicted RBP9.8□□□□□ -0.84
VPS52-217ENST00000478934 OVCH1Q7RTY7 1134 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 TSTD1Q8NFU3 115 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 SMIM4Q8WVI0 70 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ADAMTS14Q8WXS8 1223 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 PDE7BQ9NP56 450 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ABRACLQ9P1F3 81 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 GRHPRQ9UBQ7 328 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 WDFY4Q6ZS81 3184 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 G3V3Q6 166 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 DDAH2O95865 285 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 RAF1P04049 648 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ADH7P40394 386 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 FASLGP48023 281 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 PRPS1P60891 318 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 PITPNAQ00169 270 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
VPS52-217ENST00000478934 CD276Q5ZPR3 534 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 BTN2A1Q7KYR7 527 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 NLRC3Q7RTR2 1065 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 MDGA2Q7Z553 956 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 CMIPQ8IY22 773 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 SIX5Q8N196 739 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 C1orf216Q8TAB5 229 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 OR2M2Q96R28 347 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS52-217ENST00000478934 NARFLQ9H6Q4 476 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 LMAN1LQ9HAT1 526 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 EMC7Q9NPA0 242 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 CUTCQ9NTM9 273 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 KCNG2Q9UJ96 466 aa9.8□□□□□ -0.84
VPS52-217ENST00000478934 ELF5Q9UKW6 265 aaPredicted RBP9.8□□□□□ -0.84
VPS52-217ENST00000478934 TMEM131Q92545 1883 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 IL33O95760 270 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 WNT11O96014 354 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 IFI6P09912 130 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 IGFBP4P22692 258 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 CDK2P24941 298 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 CD38P28907 300 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 SDHAP31040 664 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 CSNK1EP49674 416 aaKnown RBP9.79□□□□□ -0.84
VPS52-217ENST00000478934 PSMD4P55036 377 aaKnown RBP9.79□□□□□ -0.84
VPS52-217ENST00000478934 MEP1BQ16820 701 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 LINC00303Q3SY05 128 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 NHLRC1Q6VVB1 395 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 STAC2Q6ZMT1 411 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 C9orf40Q8IXQ3 194 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 PRSS35Q8N3Z0 413 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 FTMTQ8N4E7 242 aa9.79□□□□□ -0.84
VPS52-217ENST00000478934 UXS1Q8NBZ7 420 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms