RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MAPK11Q15759 364 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 DOK3Q7L591 496 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 SERPINA11Q86U17 422 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 RETREG3Q86VR2 466 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 SNX32Q86XE0 403 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 UEVLDQ8IX04 471 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 EIF1ADQ8N9N8 165 aaKnown RBP14.63□□□□□ -0.07
VIM-204ENST00000478746 PNPT1Q8TCS8 783 aaKnown RBP14.63□□□□□ -0.07
VIM-204ENST00000478746 SNX33Q8WV41 574 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 RAB1CQ92928 201 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 TAAR8Q969N4 342 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 TIMD4Q96H15 378 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 GPA33Q99795 319 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 EMC6Q9BV81 110 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 ARMC7Q9H6L4 198 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 ZMAT3Q9HA38 289 aaKnown RBP14.63□□□□□ -0.07
VIM-204ENST00000478746 DECR2Q9NUI1 292 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 NKIRAS2Q9NYR9 191 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 ZNF224Q9NZL3 707 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 CALML5Q9NZT1 146 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 CMYA5Q8N3K9 4069 aa14.63□□□□□ -0.07
VIM-204ENST00000478746 SLC22A23A1A5C7 686 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 DNAJC9-AS1A6NH13 148 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 E9PBE3 544 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 SPAG7O75391 227 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 UBL3O95164 117 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 SERPINA5P05154 406 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 CBLP22681 906 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 GRPRP30550 384 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 KLF3P57682 345 aaPredicted RBP14.62□□□□□ -0.07
VIM-204ENST00000478746 PRKDCP78527 4128 aaKnown RBP14.62□□□□□ -0.07
VIM-204ENST00000478746 LCN2P80188 198 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 BAMBIQ13145 260 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 CAMK2DQ13557 499 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 HFEQ30201 348 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 FAM69AQ5T7M9 428 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 RNF220Q5VTB9 566 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 NET1Q7Z628 596 aaPredicted RBP14.62□□□□□ -0.07
VIM-204ENST00000478746 SYNPRQ8TBG9 265 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 TCP10LQ8TDR4 215 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 TSPAN32Q96QS1 320 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 FOXB1Q99853 325 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 SPATA9Q9BWV2 254 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 SLITRK2Q9H156 845 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 SLCO1C1Q9NYB5 712 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 P2RX2Q9UBL9 471 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 NOTCH1P46531 2555 aa14.62□□□□□ -0.07
VIM-204ENST00000478746 MS4A18H0YCH9 400 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 FZD7O75084 574 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 KRT75O95678 551 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 PATE4P0C8F1 98 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 HLA-DOBP13765 273 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 CDKN2CP42773 168 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 CRISP3P54108 245 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 HOXC5Q00444 222 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 MS4A18Q3C1V0 323 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 USP51Q70EK9 711 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 SYT14Q8NB59 555 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 OR6N1Q8NGY5 312 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 SLC38A4Q969I6 547 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 GAL3ST1Q99999 423 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 ULBP2Q9BZM5 246 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 CACYBPQ9HB71 228 aaKnown RBP14.61□□□□□ -0.07
VIM-204ENST00000478746 RPS6KB2Q9UBS0 482 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 NUP50Q9UKX7 468 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 CHST2Q9Y4C5 530 aa14.61□□□□□ -0.07
VIM-204ENST00000478746 IGLV3-9A0A075B6K5 115 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 ZNF726A6NNF4 738 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 NQO1P15559 274 aaKnown RBP14.6□□□□□ -0.07
VIM-204ENST00000478746 ZNF250P15622 560 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 MOGQ16653 247 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 TUSC1Q2TAM9 212 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 ARMCX4Q5H9R4 360 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 WDR93Q6P2C0 686 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 C5orf46Q6UWT4 87 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 ZNF771Q7L3S4 317 aaPredicted RBP14.6□□□□□ -0.07
VIM-204ENST00000478746 ZNF584Q8IVC4 421 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 WDFY1Q8IWB7 410 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.6□□□□□ -0.07
VIM-204ENST00000478746 C11orf40Q8WZ69 217 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 POP5Q969H6 163 aaKnown RBP14.6□□□□□ -0.07
VIM-204ENST00000478746 SLC25A28Q96A46 364 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 TXNDC15Q96J42 360 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 ZNF69Q9UC07 566 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 CACNG2Q9Y698 323 aa14.6□□□□□ -0.07
VIM-204ENST00000478746 TRAV36DV7A0A075B6V5 113 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 HPRP00739 348 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 LCKP06239 509 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 BCHEP06276 602 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 BPGMP07738 259 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 RNASE1P07998 156 aaKnown RBP14.59□□□□□ -0.07
VIM-204ENST00000478746 NME5P56597 212 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 VSNL1P62760 191 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 RBBP4Q09028 425 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 OCLNQ16625 522 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 TSTQ16762 297 aaKnown RBP14.59□□□□□ -0.07
VIM-204ENST00000478746 PIWIL3Q7Z3Z3 882 aaKnown RBP14.59□□□□□ -0.07
VIM-204ENST00000478746 SKA3Q8IX90 412 aa14.59□□□□□ -0.07
VIM-204ENST00000478746 MIER2Q8N344 545 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms