RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CPPED1Q9BRF8 314 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CHODLQ9H9P2 273 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 NOX3Q9HBY0 568 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 NDUFAF1Q9Y375 327 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 M0R233 179 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 TPST1O60507 370 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 FARS2O95363 451 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 BGLAPP02818 100 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 GIFP27352 417 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 CDH12P55289 794 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 HGFACQ04756 655 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 TTC33Q6PID6 262 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 MPP4Q96JB8 637 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 MCHR1Q99705 422 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 FOXB1Q99853 325 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 MS4A5Q9H3V2 200 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 INTS9Q9NV88 658 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 SLAMF8Q9P0V8 285 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 HMGB1P1B2RPK0 211 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 SYNGR3O43761 229 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 SERPINI2O75830 405 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 SEC14L2O76054 403 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 MFN2O95140 757 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 STAMBPO95630 424 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 TGFAP01135 160 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 HLA-HP01893 362 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 CELA3BP08861 270 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 B4GALT1P15291 398 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 NR4A1P22736 598 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 PCBP3P57721 371 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 SELENOVP59797 346 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 ADRM1Q16186 407 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 RUNDC3AQ59EK9 446 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 KRT80Q6KB66 452 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 PIWIL3Q7Z3Z3 882 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF786Q8N393 782 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 DPP10Q8N608 796 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 MSI2Q96DH6 328 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 CGREF1Q99674 301 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 SH3GL1Q99961 368 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 EMC6Q9BV81 110 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 C1orf198Q9H425 327 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 NANSQ9NR45 359 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 MED29Q9NX70 200 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 CR1P17927 2039 aa12.5□□□□□ -0.41
SMARCE1-209ENST00000478349 MXRA5Q9NR99 2828 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 IGHV4-61A0A0C4DH41 118 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 PLPP3O14495 311 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 HPRP00739 348 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 IFNGR1P15260 489 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 CD247P20963 164 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 IGFBP5P24593 272 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 PTDSS1P48651 473 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 CAMK2DQ13557 499 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 NFYCQ13952 458 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 FAM120AOSQ5T036 256 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 PHC2Q8IXK0 858 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 SMYD1Q8NB12 490 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 OR6X1Q8NH79 312 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 UBASH3BQ8TF42 649 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF566Q969W8 418 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 MOGAT1Q96PD6 335 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 DOK1Q99704 481 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 SEC61A2Q9H9S3 476 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC52A3Q9NQ40 469 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 B3GNT2Q9NY97 397 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 STX18Q9P2W9 335 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC7A8Q9UHI5 535 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF229Q9UJW7 825 aa12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF346Q9UL40 294 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-209ENST00000478349 SH3PXD2BA1X283 911 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 CPSF4LA6NMK7 179 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 M0R3H8 397 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 RNF13O43567 381 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 PTHP01270 115 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 TACSTD2P09758 323 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 UMPSP11172 480 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 NR2C1P13056 603 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 APEX1P27695 318 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms