RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SELENOVP59797 346 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 BAMBIQ13145 260 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 RAB39AQ14964 217 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 ARMCX4Q5H9R4 360 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 CARD17Q5XLA6 110 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 USP51Q70EK9 711 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF584Q8IVC4 421 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 WDFY1Q8IWB7 410 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 ADPRHL1Q8NDY3 354 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 DEFB108BQ8NET1 73 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 RAB1CQ92928 201 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 SLC25A28Q96A46 364 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 TSPAN32Q96QS1 320 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 GAL3ST1Q99999 423 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 B3GAT2Q9NPZ5 323 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 PLEK2Q9NYT0 353 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 BTNL2Q9UIR0 455 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 POFUT2Q9Y2G5 429 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 CACNG2Q9Y698 323 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF250P15622 560 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 ATP4BP51164 291 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 CLNS1AP54105 237 aaKnown RBP17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 AQP5P55064 265 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 COX20Q5RI15 118 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 FAM69AQ5T7M9 428 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 C6orf89Q6UWU4 347 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 SERPINA11Q86U17 422 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 SNX32Q86XE0 403 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 UEVLDQ8IX04 471 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 CLIP4Q8N3C7 705 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 TRIML2Q8N7C3 387 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 ZNF48Q96MX3 618 aaPredicted RBP17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 FOXB1Q99853 325 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 SLCO1C1Q9NYB5 712 aa17.2■□□□□ 0.34
PDLIM1-202ENST00000477757 CCDC154A6NI56 674 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 E9PBE3 544 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 OR2T1O43869 369 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 SERPINA5P05154 406 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 MDKP21741 143 aaPredicted RBP17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 GRPRP30550 384 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 HFEQ30201 348 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 KLF17Q5JT82 389 aaPredicted RBP17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 LEG1Q6P5S2 330 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 C5orf46Q6UWT4 87 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 H1FNTQ75WM6 255 aaPredicted RBP17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 SYNPRQ8TBG9 265 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 PNPT1Q8TCS8 783 aaKnown RBP17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 EPS8L3Q8TE67 593 aaKnown RBP17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 ULBP2Q9BZM5 246 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 AKTIPQ9H8T0 292 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 SAP30LQ9HAJ7 183 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 P2RX2Q9UBL9 471 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 CHST2Q9Y4C5 530 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 WNK1Q9H4A3 2382 aa17.19■□□□□ 0.34
PDLIM1-202ENST00000477757 NBEAL2Q6ZNJ1 2754 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 ARHGAP32A7KAX9 2087 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 HPRP00739 348 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 FAM157BP0CG42 384 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 S100A3P33764 101 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 CAMK2DQ13557 499 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 LARS2Q15031 903 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 HIST2H2BDQ6DRA6 164 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 BCL6BQ8N143 479 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 PAQR4Q8N4S7 273 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 TAF15Q92804 592 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC38A4Q969I6 547 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 TAAR8Q969N4 342 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 TRIM44Q96DX7 344 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 PANX1Q96RD7 426 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 EMC6Q9BV81 110 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 DECR2Q9NUI1 292 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 CALML5Q9NZT1 146 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC17A7Q9P2U7 560 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 LEF1Q9UJU2 399 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 PURGQ9UJV8 347 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 MMP24Q9Y5R2 645 aa17.18■□□□□ 0.34
PDLIM1-202ENST00000477757 TPD52L2O43399 206 aaKnown RBP17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 FOXH1O75593 365 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 HLA-DOBP13765 273 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 CDKN2CP42773 168 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC9A3R2Q15599 337 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 SLC30A7Q8NEW0 376 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 ZNF519Q8TB69 540 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 GTF3AQ92664 365 aaKnown RBP17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 PPP1R36Q96LQ0 422 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 SPATA9Q9BWV2 254 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 C12orf10Q9HB07 376 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 KLHL14Q9P2G3 628 aa17.17■□□□□ 0.34
PDLIM1-202ENST00000477757 MT-ND5P03915 603 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 BCHEP06276 602 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 PATE4P0C8F1 98 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 CRISP3P54108 245 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 ERVS71-1P61550 626 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 RBBP4Q09028 425 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 NHLRC1Q6VVB1 395 aa17.16■□□□□ 0.34
PDLIM1-202ENST00000477757 NET1Q7Z628 596 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms