RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 WFDC11Q8NEX6 87 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 IGFBPL1Q8WX77 278 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 HSD17B8Q92506 261 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 SEMA6AQ9H2E6 1030 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 RASSF4Q9H2L5 321 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 SAMHD1Q9Y3Z3 626 aaKnown RBP15.49■□□□□ 0.07
PTPN7-209ENST00000477554 SLC25A15Q9Y619 301 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 CIB4A0PJX0 185 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 TNFRSF11BO00300 401 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 TRAF3IP2O43734 574 aaPredicted RBP15.48■□□□□ 0.07
PTPN7-209ENST00000477554 CHP2O43745 196 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF432O94892 652 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 HIKESHIQ53FT3 197 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 NKAIN4Q8IVV8 208 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 AKAP1Q92667 903 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN7-209ENST00000477554 MBD6Q96DN6 1003 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 TXNDC15Q96J42 360 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 MPP4Q96JB8 637 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 EMC6Q9BV81 110 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 SLCO5A1Q9H2Y9 848 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 TAS2R16Q9NYV7 291 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 RHCGQ9UBD6 479 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 UPB1Q9UBR1 384 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 NKX1-2Q9UD57 310 aaPredicted RBP15.48■□□□□ 0.07
PTPN7-209ENST00000477554 TMCC3Q9ULS5 477 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 RASD1Q9Y272 281 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 LYVE1Q9Y5Y7 322 aa15.48■□□□□ 0.07
PTPN7-209ENST00000477554 CNOT4O95628 575 aaKnown RBP15.47■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF83P51522 516 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 TUBA1BP68363 451 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 TUBA4AP68366 448 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 ADAM8P78325 824 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 FGD3Q5JSP0 725 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 TIMM23BQ5SRD1 257 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 TUBA1AQ71U36 451 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 SVOPLQ8N434 492 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 OR52J3Q8NH60 311 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 OR5K1Q8NHB7 308 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 PFN4Q8NHR9 129 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 NRBF2Q96F24 287 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 HS6ST2Q96MM7 605 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 MUS81Q96NY9 551 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 NELFAQ9H3P2 528 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 NTN4Q9HB63 628 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 FANCFQ9NPI8 374 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 MEPEQ9NQ76 525 aaPredicted RBP15.47■□□□□ 0.07
PTPN7-209ENST00000477554 MED29Q9NX70 200 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 U3KQV3 271 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 ACANP16112 2415 aa15.47■□□□□ 0.07
PTPN7-209ENST00000477554 SHISA9B4DS77 424 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 SERPINI2O75830 405 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 CH25HO95992 272 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF23P17027 643 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 UGT2B15P54855 530 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 CARD17Q5XLA6 110 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 SHQ1Q6PI26 577 aaKnown RBP15.46■□□□□ 0.07
PTPN7-209ENST00000477554 H1FNTQ75WM6 255 aaPredicted RBP15.46■□□□□ 0.07
PTPN7-209ENST00000477554 RRM2BQ7LG56 351 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 MEX3DQ86XN8 651 aaKnown RBP15.46■□□□□ 0.07
PTPN7-209ENST00000477554 HIPK1Q86Z02 1210 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 ZDHHC13Q8IUH4 622 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 LINC00471Q8N535 108 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 ICA1LQ8NDH6 482 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 TMEM255BQ8WV15 326 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 OXGR1Q96P68 337 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 ALPK1Q96QP1 1244 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 TMEM43Q9BTV4 400 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF426Q9BUY5 554 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 MAN2C1Q9NTJ4 1040 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 C20orf141Q9NUB4 165 aa15.46■□□□□ 0.07
PTPN7-209ENST00000477554 USF3Q68DE3 2245 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 A0A096LPE4 126 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 A0A1W2PPZ6 126 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 ZNF503-AS2A6NEH8 195 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 G3V2T6 193 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 PIP5K1CO60331 668 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 SEC14L2O76054 403 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 SOD3P08294 240 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 FUT1P19526 365 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 GTF2E2P29084 291 aaKnown RBP15.45■□□□□ 0.06
PTPN7-209ENST00000477554 RBM34P42696 430 aaKnown RBP15.45■□□□□ 0.06
PTPN7-209ENST00000477554 LIMS1P48059 325 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 IL1RL1Q01638 556 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 SLC46A3Q7Z3Q1 461 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 TMEM123Q8N131 208 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 C10orf53Q8N6V4 93 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 OR4C15Q8NGM1 316 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 SLC7A13Q8TCU3 470 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 ACOT11Q8WXI4 607 aaPredicted RBP15.45■□□□□ 0.06
PTPN7-209ENST00000477554 OR2M2Q96R28 347 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 CCL19Q99731 98 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 C9orf16Q9BUW7 83 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 SEC61A2Q9H9S3 476 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 PARPBPQ9NWS1 579 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 VNN3Q9NY84 501 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 RNF115Q9Y4L5 304 aa15.45■□□□□ 0.06
PTPN7-209ENST00000477554 FLNAP21333 2647 aaKnown RBP15.45■□□□□ 0.06
PTPN7-209ENST00000477554 C11orf98E9PRG8 122 aa15.44■□□□□ 0.06
PTPN7-209ENST00000477554 PLPP3O14495 311 aa15.44■□□□□ 0.06
PTPN7-209ENST00000477554 HS3ST1O14792 307 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms