RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FAM90A27PA6NNH2 459 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 MRPL33O75394 65 aaKnown RBP13.58□□□□□ -0.24
SEC13-215ENST00000477547 PPP1R3DO95685 299 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 IGHMP01871 453 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 DAPP51397 102 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 BIDP55957 195 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 CTXN1P60606 82 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 PPP2R2BQ00005 443 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 DAG1Q14118 895 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ACKR1Q16570 336 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 CBR4Q8N4T8 237 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ZIC4Q8N9L1 334 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 OR8D4Q8NGM9 314 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 TEX47Q8TBZ9 253 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ASB10Q8WXI3 467 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 EME1Q96AY2 570 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 SAMD8Q96LT4 415 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 RBM4BQ9BQ04 359 aaKnown RBP13.58□□□□□ -0.24
SEC13-215ENST00000477547 RBM4Q9BWF3 364 aaKnown RBP13.58□□□□□ -0.24
SEC13-215ENST00000477547 PLA2G12AQ9BZM1 189 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 RNPEPL1Q9HAU8 725 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 ZNF629Q9UEG4 869 aaPredicted RBP13.58□□□□□ -0.24
SEC13-215ENST00000477547 ADAM18Q9Y3Q7 739 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 H3BN98 237 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 PTP4A3O75365 173 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 BCL10O95999 233 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 CD14P08571 375 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 EDNRAP25101 427 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 PEX2P28328 305 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 OR3A2P47893 321 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 SELENOPP49908 381 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 ERVK-25P63136 954 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 COX10Q12887 443 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 KDM4DQ6B0I6 523 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 MRGPRGQ86SM5 289 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 LIX1LQ8IVB5 337 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 ZNF808Q8N4W9 903 aaPredicted RBP13.57□□□□□ -0.24
SEC13-215ENST00000477547 CA5BP1Q8WTZ4 195 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
SEC13-215ENST00000477547 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
SEC13-215ENST00000477547 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 TSPAN32Q96QS1 320 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 OR2M2Q96R28 347 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 EMC6Q9BV81 110 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 IFT27Q9BW83 186 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 OSBPL10Q9BXB5 764 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 ENKD1Q9H0I2 346 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 OPN3Q9H1Y3 402 aaPredicted RBP13.57□□□□□ -0.24
SEC13-215ENST00000477547 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 PIGMQ9H3S5 423 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 REV1Q9UBZ9 1251 aa13.57□□□□□ -0.24
SEC13-215ENST00000477547 TEX13CA0A0J9YWL9 993 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 SLC35F4A4IF30 521 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 SOCS2O14508 198 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 MITFO75030 526 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 SLC43A1O75387 559 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 IGHV3-9P01782 118 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 TP53P04637 393 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 IGFBP1P08833 259 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 CD8BP10966 210 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 OSMP13725 252 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 NTF4P34130 210 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 KRR1Q13601 381 aaKnown RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 RFX4Q33E94 735 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 SLC25A35Q3KQZ1 300 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 CARD17Q5XLA6 110 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 FAM205BPQ63HN1 556 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 NHLRC1Q6VVB1 395 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 LUZP2Q86TE4 346 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 RASD2Q96D21 266 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 ALKBH3Q96Q83 286 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 SLCO5A1Q9H2Y9 848 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 NRIP3Q9NQ35 241 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 IL20Q9NYY1 176 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 USE1Q9NZ43 259 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 NKX1-2Q9UD57 310 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 PRSS50Q9UI38 385 aa13.56□□□□□ -0.24
SEC13-215ENST00000477547 TMEFF2Q9UIK5 374 aaPredicted RBP13.56□□□□□ -0.24
SEC13-215ENST00000477547 ZNF726A6NNF4 738 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 MGRN1O60291 552 aa13.55□□□□□ -0.24
SEC13-215ENST00000477547 ZNF432O94892 652 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms