RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GPRIN2O60269 458 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF432O94892 652 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SYPP08247 313 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 JMJD7P0C870 316 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ATF4P18848 351 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ACY1Q03154 408 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 HTR4Q13639 388 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 MANEAQ5SRI9 462 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 GARNL3Q5VVW2 1013 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 AWAT2Q6E213 333 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 OR13C9Q8NGT0 318 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 OR5H6Q8NGV6 325 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF681Q96N22 645 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SEMA4CQ9C0C4 833 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ACOT7O00154 380 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 INHBBP09529 407 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 CRABP1P29762 137 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 AFF3P51826 1226 aaKnown RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SRYQ05066 204 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 PRICKLE4Q2TBC4 344 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 Q499Y3 187 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SLC22A6Q4U2R8 563 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF628Q5EBL2 1059 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 AADACL4Q5VUY2 407 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SEC22CQ9BRL7 303 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 CDCP1Q9H5V8 836 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 FLVCR2Q9UPI3 526 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SLC22A13Q9Y226 551 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 LAMTOR5O43504 91 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SLC22A5O76082 557 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 GLCEO94923 617 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 UBL3O95164 117 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ATP1B1P05026 303 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 CTSBP07858 339 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 FOSL2P15408 326 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 RBMS1P29558 406 aaKnown RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 GPR139Q6DWJ6 353 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 OR10K2Q6IF99 312 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 ABI3BPQ7Z7G0 1075 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 AUNIPQ9H7T9 357 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 HHLA2Q9UM44 414 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 COA3Q9Y2R0 106 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-204ENST00000477421 NUBP2Q9Y5Y2 271 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 HEATR5BQ9P2D3 2071 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GOSR2O14653 212 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SIX6O95475 246 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CBX7O95931 251 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 FUT5Q11128 374 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GPR50Q13585 617 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ALKBH1Q13686 389 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ACKR1Q16570 336 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 METAP1DQ6UB28 335 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CFAP77Q6ZQR2 320 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 COX15Q7KZN9 410 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 PPP1R3BQ86XI6 285 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GALNT11Q8NCW6 608 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 OR52I2Q8NH67 350 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SLC22A8Q8TCC7 542 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 NT5CQ8TCD5 201 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 STT3BQ8TCJ2 826 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 RNF170Q96K19 258 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 MED29Q9NX70 200 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 DICER1Q9UPY3 1922 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 AKR7A2O43488 359 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 AKR7A3O95154 331 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SPDEFO95238 335 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 DIO1P49895 249 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 AKR1D1P51857 326 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CXADRP78310 365 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 FAPQ12884 760 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ASAH1Q13510 395 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 BEX5Q5H9J7 111 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 LYSMD4Q5XG99 296 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 BEST3Q8N1M1 668 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SPERTQ8NA61 448 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 THAP6Q8TBB0 222 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 KTI12Q96EK9 354 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SPACA5Q96QH8 159 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM43Q9BTV4 400 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 KANTRA0A1W2PQU2 76 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 FITM1A5D6W6 292 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 PSMB1P20618 241 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ETV6P41212 452 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 UBE2MP61081 183 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 EFR3AQ14156 821 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GLYATL3Q5SZD4 288 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF770Q6IQ21 691 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM205Q6UW68 189 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 IL17RDQ8NFM7 739 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms