RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 KLHDC1Q8N7A1 406 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF248Q8NDW4 579 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C19orf18Q8NEA5 215 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 OR2AP1Q8NGE2 309 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 OR6K6Q8NGW6 343 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CNIH3Q8TBE1 160 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PLPPR1Q8TBJ4 325 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TEX47Q8TBZ9 253 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FAM110BQ8TC76 370 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 GPR148Q8TDV2 347 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PHF10Q8WUB8 498 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM174Q8WUU8 243 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 IL1F10Q8WWZ1 152 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ASB10Q8WXI3 467 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CDS1Q92903 461 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 MYDGFQ969H8 173 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM143Q96AN5 459 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 BIRC7Q96CA5 298 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 DUS3LQ96G46 650 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FAHD2AQ96GK7 314 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 NSL1Q96IY1 281 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C4orf45Q96LM5 186 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ADOQ96SZ5 270 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TIMP4Q99727 224 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ECSITQ9BQ95 431 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RSG1Q9BU20 258 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 APOOQ9BUR5 198 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 POLDIP3Q9BY77 421 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SPRY4Q9C004 299 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 OR51M1Q9H341 326 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RNF41Q9H4P4 317 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ARMC7Q9H6L4 198 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SLC40A1Q9NP59 571 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 NDE1Q9NXR1 346 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 WARS2Q9UGM6 360 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C3orf18Q9UK00 162 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TMCO1Q9UM00 188 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SCML1Q9UN30 329 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FZD1Q9UP38 647 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 EXOSC1Q9Y3B2 195 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 USP16Q9Y5T5 823 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TSSC4Q9Y5U2 329 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CSMD2Q7Z408 3487 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ADGRG4Q8IZF6 3080 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PDS5AQ29RF7 1337 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CHD7Q9P2D1 2997 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 A0A0A6YYD4 124 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NSG1A0A0A6YYJ2 146 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 hDV102S1A0JD36 115 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 GOLGA6L4A6NEF3 574 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SRRM4A7MD48 611 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM114B3SHH9 223 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 M0R036 132 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 DCTN6O00399 190 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PRRG2O14669 202 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SLC16A4O15374 487 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PPIHO43447 177 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SNAI2O43623 268 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 FOXS1O43638 330 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PFKFB2O60825 505 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 FAM20BO75063 409 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 WDR1O75083 606 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 F10P00742 488 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 IGHG4P01861 327 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 APOEP02649 317 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RHOCP08134 193 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CT62P0C5K7 136 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 IGHV4-31P0DP07 118 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CHRNB1P11230 501 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 HOXB2P14652 356 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SPINK2P20155 84 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NPR2P20594 1047 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MAGP20916 626 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PRPS1L1P21108 318 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SYT1P21579 422 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TEAD1P28347 426 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MAS1LP35410 378 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 VHLP40337 213 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OPRD1P41143 372 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MAP3K8P41279 467 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 NSG1P42857 185 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 BDKRB1P46663 353 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 GLUD2P49448 558 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 TMED10P49755 219 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SERPINB9P50453 376 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 DNA2P51530 1060 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 CCR8P51685 355 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 XKP51811 444 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 PLK1P53350 603 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 UGT2B15P54855 530 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RWDD2BP57060 319 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 MLF1P58340 268 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ABCE1P61221 599 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 RPS13P62277 151 aaKnown RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 S100A12P80511 92 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 OC90Q02509 493 aaPredicted RBP2.51□□□□□ -2.01
HMGN4-202ENST00000477243 ARL16Q0P5N6 197 aa2.51□□□□□ -2.01
HMGN4-202ENST00000477243 SCRN3Q0VDG4 424 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms