RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 MT-ND4P03905 459 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ALDOBP05062 364 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CELA2BP08218 269 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF35P13682 527 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 BMP7P18075 431 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 IDSP22304 550 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ADORA2BP29275 332 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SSTR1P30872 391 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 WASP42768 502 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 DUSP3P51452 185 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 EEFSECP57772 596 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 TBPL1P62380 186 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PSG6Q00889 435 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PJVKQ0ZLH3 352 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF234Q14588 700 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PSG5Q15238 335 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TAF9Q16594 264 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 UGCGQ16739 394 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 EIPR1Q53HC9 387 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 PLAG1Q6DJT9 500 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FCRL6Q6DN72 434 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TBC1D3CQ6IPX1 549 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 C16orf89Q6UX73 402 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CHRDL2Q6WN34 429 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF621Q6ZSS3 439 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TMPPEQ6ZT21 453 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CDHR3Q6ZTQ4 885 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SLC29A4Q7RTT9 530 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CLNKQ7Z7G1 428 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TBC1D3Q8IZP1 549 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ARHGEF39Q8N4T4 335 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ENGASEQ8NFI3 743 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SLC35B2Q8TB61 432 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 XAGE5Q8WWM1 108 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GPKOWQ92917 476 aaPredicted RBP eCLIP3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZBTB8AQ96BR9 441 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CXorf40BQ96DE9 158 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 HSPA12BQ96MM6 686 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CDK15Q96Q40 435 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ACCSQ96QU6 501 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 P2RX4Q99571 388 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 WWTR1Q9GZV5 400 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FRRS1LQ9P0K9 344 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PILRBQ9UKJ0 227 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FBXO5Q9UKT4 447 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 RAB22AQ9UL26 194 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MTCH2Q9Y6C9 303 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 BCORL1Q5H9F3 1711 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ABCC3O15438 1527 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 OR6C6A6NF89 314 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SAC3D1A6NKF1 404 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 HSPB2A8KAH6 182 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ZNF878C9JN71 531 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 G3V3G9 751 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 PIAS1O75925 651 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 OR6A2O95222 327 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 MBPP02686 304 aaPredicted RBP3.15□□□□□ -1.9
UBR3-208ENST00000474426 CTSLP07711 333 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SFTPBP07988 381 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 BMP4P12644 408 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SELEP16581 610 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 CCKARP32238 428 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 GGT2P36268 569 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 CPOXP36551 454 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 IDH3AP50213 366 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 NAPAP54920 295 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 F2RL1P55085 397 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 TMPRSS3P57727 454 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SESN2P58004 480 aaPredicted RBP3.15□□□□□ -1.9
UBR3-208ENST00000474426 ERVFRD-1P60508 538 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ZNF844Q08AG5 666 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 CEACAM7Q14002 265 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SLC10A1Q14973 349 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ZIC1Q15915 447 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 HSPB2Q16082 182 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 OR4A47Q6IF82 309 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 FAM183BPQ6ZVS7 135 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SPPL2CQ8IUH8 684 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 SLC38A9Q8NBW4 561 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 OR4A16Q8NH70 328 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 C16orf52Q8NHV5 167 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 MYLIPQ8WY64 445 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 PIK3IP1Q96FE7 263 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 RAB34Q9BZG1 259 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ABCG5Q9H222 651 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 CRISPLD1Q9H336 500 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 FAM83DQ9H4H8 585 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 CXorf21Q9HAI6 301 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ADGRL4Q9HBW9 690 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 AMBNQ9NP70 447 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 TMEM161AQ9NX61 479 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ABI3Q9P2A4 366 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 ZNF230Q9UIE0 474 aaPredicted RBP3.15□□□□□ -1.9
UBR3-208ENST00000474426 CFAP20Q9Y6A4 193 aaKnown RBP3.15□□□□□ -1.9
UBR3-208ENST00000474426 OVOS2A0A0G2JMS6 1433 aa3.15□□□□□ -1.9
UBR3-208ENST00000474426 KIF14Q15058 1648 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms