RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SMIM5Q71RC9 77 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 COPS6Q7L5N1 327 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 RANBP3LQ86VV4 465 aaPredicted RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 ZNF565Q8N9K5 539 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 FBXL13Q8NEE6 735 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 OR4A4PQ8NGN8 299 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 CCDC12Q8WUD4 166 aaPredicted RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 NR4A3Q92570 626 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 CREB3L1Q96BA8 519 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 SERAC1Q96JX3 654 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 PPP1R36Q96LQ0 422 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 ZNF300Q96RE9 604 aaPredicted RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 RANBP9Q96S59 729 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 KIR2DL4Q99706 377 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 RARRES2Q99969 163 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 GAL3ST1Q99999 423 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 P2RY13Q9BPV8 354 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 FEM1AQ9BSK4 669 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 NAT9Q9BTE0 207 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 LRRC1Q9BTT6 524 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 RNF126Q9BV68 326 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 DGCR6LQ9BY27 220 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 SDF2L1Q9HCN8 221 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 MRPS30Q9NP92 439 aaKnown RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 CUTCQ9NTM9 273 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 CACNG5Q9UF02 275 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 WARS2Q9UGM6 360 aaKnown RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 MLXQ9UH92 298 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 GNPTGQ9UJJ9 305 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 ELF5Q9UKW6 265 aaPredicted RBP2.17□□□□□ -2.06
XRN1-210ENST00000472697 PPP1R3CQ9UQK1 317 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 CDH10Q9Y6N8 788 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 PLXNA3P51805 1871 aa2.17□□□□□ -2.06
XRN1-210ENST00000472697 DNAJC9-AS1A6NH13 148 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 HIP1O00291 1037 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 SLC19A2O60779 497 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 PROP1O75360 226 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 MTRF1O75570 445 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 GPX5O75715 221 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CCL5P13501 91 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ZNF3P17036 446 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CTRB1P17538 263 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 BCL3P20749 454 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CD82P27701 267 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ART1P52961 327 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 PMS2P3Q13401 168 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 FHL1Q13642 323 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 SLC10A1Q14973 349 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 SYCP1Q15431 976 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ZIC1Q15915 447 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 KYAT1Q16773 422 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 VPS26BQ4G0F5 336 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 STPG1Q5TH74 334 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CTRB2Q6GPI1 263 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 FOXL2NBQ6ZUU3 175 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 STOX1Q6ZVD7 989 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 MRPL21Q7Z2W9 205 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 CYP4Z1Q86W10 505 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CARM1Q86X55 608 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 MICU2Q8IYU8 434 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CEP112Q8N8E3 955 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 OR6S1Q8NH40 331 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 OR51F2Q8NH61 342 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 FNDC8Q8TC99 324 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 UBE2E3Q969T4 207 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 PSMG2Q969U7 264 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 NRBF2Q96F24 287 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 FAIM2Q9BWQ8 316 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 C1QTNF4Q9BXJ3 329 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ACTR6Q9GZN1 396 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 GBA3Q9H227 469 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 C1orf198Q9H425 327 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 EML4Q9HC35 981 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 ADA2Q9NZK5 511 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 IKZF2Q9UKS7 526 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 TSSC4Q9Y5U2 329 aaPredicted RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 MTCL1Q9Y4B5 1905 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 ABCC12Q96J65 1359 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 YKT6O15498 198 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CBR3O75828 277 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 NOL4O94818 638 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CCNB2O95067 398 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CLDN9O95484 217 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CLPTM1O96005 669 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 IVLP07476 585 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 SDC1P18827 310 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 CCKBRP32239 447 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 DAP3P51398 398 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 KPNA2P52292 529 aaKnown RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 ARHGDIAP52565 204 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 APOC4P55056 127 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 STX3Q13277 289 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 LTB4RQ15722 352 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 HAGHQ16775 308 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 KCTD19Q17RG1 926 aaPredicted RBP2.16□□□□□ -2.06
XRN1-210ENST00000472697 NSUN5P1Q3KNT7 163 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 KIAA1644Q3SXP7 199 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 LGSNQ5TDP6 509 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ERICH5Q6P6B1 374 aa2.16□□□□□ -2.06
XRN1-210ENST00000472697 ZNF621Q6ZSS3 439 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms