RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TMEM160Q9NX00 188 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 POFUT2Q9Y2G5 429 aa19.52■□□□□ 0.72
C9orf3-213ENST00000471978 MT-ATP6P00846 226 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 HLA-HP01893 362 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 FAM157CP0CG43 387 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 CD79AP11912 226 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 GZMKP49863 264 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 NFYCQ13952 458 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 NPTX1Q15818 432 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF813Q6ZN06 617 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 SPATA21Q7Z572 469 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 SVOPLQ8N434 492 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 OR6T1Q8NGN1 323 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 OR6N1Q8NGY5 312 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 OR5J2Q8NH18 312 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 BEX2Q9BXY8 128 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 ULBP2Q9BZM5 246 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 KAT8Q9H7Z6 458 aaKnown RBP19.51■□□□□ 0.71
C9orf3-213ENST00000471978 NPHS2Q9NP85 383 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 B3GNT2Q9NY97 397 aa19.51■□□□□ 0.71
C9orf3-213ENST00000471978 CPSF4LA6NMK7 179 aaKnown RBP19.5■□□□□ 0.71
C9orf3-213ENST00000471978 C11orf98E9PRG8 122 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 CHP2O43745 196 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 OR6A2O95222 327 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 ADORA3P0DMS8 318 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 PIGFQ07326 219 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 SNTB2Q13425 540 aaKnown RBP19.5■□□□□ 0.71
C9orf3-213ENST00000471978 DAG1Q14118 895 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 GSG1Q2KHT4 349 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 ENTPD8Q5MY95 495 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 KRT80Q6KB66 452 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 HDXQ7Z353 690 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 PATL1Q86TB9 770 aaKnown RBP19.5■□□□□ 0.71
C9orf3-213ENST00000471978 SNX32Q86XE0 403 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 RBM45Q8IUH3 476 aaKnown RBP19.5■□□□□ 0.71
C9orf3-213ENST00000471978 SLC30A8Q8IWU4 369 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 VANGL1Q8TAA9 524 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-213ENST00000471978 TSPEARQ8WU66 669 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 DOK1Q99704 481 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 NOX3Q9HBY0 568 aa19.5■□□□□ 0.71
C9orf3-213ENST00000471978 IGHV4-61A0A0C4DH41 118 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 RNF212BA8MTL3 300 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 APEHP13798 732 aaKnown RBP19.49■□□□□ 0.71
C9orf3-213ENST00000471978 B4GALT1P15291 398 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 IQCCQ4KMZ1 466 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 WDR88Q6ZMY6 472 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF627Q7L945 461 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 ZCCHC24Q8N2G6 241 aaKnown RBP19.49■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF540Q8NDQ6 660 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 OR4D11Q8NGI4 311 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 LPAR3Q9UBY5 353 aa19.49■□□□□ 0.71
C9orf3-213ENST00000471978 A0A0G2JND7 137 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 TMEM129A0AVI4 362 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 SH3PXD2BA1X283 911 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 LMX1BO60663 402 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 EDF1O60869 148 aaKnown RBP19.48■□□□□ 0.71
C9orf3-213ENST00000471978 LYPD3O95274 346 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 CH25HO95992 272 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 THY1P04216 161 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 ERCC1P07992 297 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-213ENST00000471978 IFNGR1P15260 489 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 CD247P20963 164 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 NR4A1P22736 598 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 PCGF2P35227 344 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 CSNK1A1P48729 337 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 BIDP55957 195 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 TTC33Q6PID6 262 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-213ENST00000471978 OR10A6Q8NH74 314 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 SLC26A7Q8TE54 656 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 ADAMTS16Q8TE57 1224 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 NEU4Q8WWR8 484 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-213ENST00000471978 MS4A3Q96HJ5 214 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 FOXB1Q99853 325 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 SIKE1Q9BRV8 207 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 SHARPINQ9H0F6 387 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 DYNLRB1Q9NP97 96 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 CMAHPQ9Y471 501 aa19.48■□□□□ 0.71
C9orf3-213ENST00000471978 LOC100289279A0A1B0GTE1 492 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 TRAPPC13A5PLN9 417 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 DAOP14920 347 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF14P17017 642 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-213ENST00000471978 PTDSS1P48651 473 aaKnown RBP19.47■□□□□ 0.71
C9orf3-213ENST00000471978 ZNF74Q16587 644 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 INTS11Q5TA45 600 aaKnown RBP19.47■□□□□ 0.71
C9orf3-213ENST00000471978 FAM166AQ6J272 317 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 SLC35D2Q76EJ3 337 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 CDK20Q8IZL9 346 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 ARIH2OSQ8N7S6 290 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 TAMM41Q96BW9 452 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 MSI2Q96DH6 328 aaKnown RBP19.47■□□□□ 0.71
C9orf3-213ENST00000471978 BPESC1Q9GZL8 116 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 VIPAS39Q9H9C1 493 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 NANSQ9NR45 359 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 TAS2R5Q9NYW4 299 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 KCNS2Q9ULS6 477 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 SLC7A7Q9UM01 511 aa19.47■□□□□ 0.71
C9orf3-213ENST00000471978 KPNA4O00629 521 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-213ENST00000471978 STAMBPO95630 424 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 GIPRP48546 466 aa19.46■□□□□ 0.71
C9orf3-213ENST00000471978 RAB1AP62820 205 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms