RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SLC46A2Q9BY10 475 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 XYLT2Q9H1B5 865 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ADAM23O75077 832 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FCRLAQ7L513 359 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TSPYL5Q86VY4 417 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR10G3Q8NGC4 313 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EMG1Q92979 244 aaKnown RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UTP4Q969X6 686 aaKnown RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TRMT61AQ96FX7 289 aaKnown RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR2B2Q9GZK3 357 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF230Q9UIE0 474 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRRG2O14669 202 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF264O43296 627 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PARS2Q7L3T8 475 aaKnown RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TMEM178AQ8NBL3 297 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DTD2Q96FN9 168 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF813Q6ZN06 617 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CDCA3Q99618 268 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MKS1Q9NXB0 559 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GSCP56915 257 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EMC7Q9NPA0 242 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CACNG2Q9Y698 323 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 STYXL1Q9Y6J8 313 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 IGHV3-20A0A0C4DH32 117 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MAGEB4O15481 346 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LYRM1O43325 122 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DNAJB1P25685 340 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EBPQ15125 230 aaKnown RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BPIFB2Q8N4F0 458 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AMBRA1Q9C0C7 1298 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC10A3P09131 477 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR8G3PP0DMU2 310 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HOXD13P35453 343 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRSS12P56730 875 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CATR1Q13166 79 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF789Q5FWF6 425 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DNAJC22Q8N4W6 341 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TECTBQ96PL2 329 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC2A13Q96QE2 648 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 COPS3Q9UNS2 423 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CDK4P11802 303 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FOXA1P55317 472 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SPATS1Q496A3 300 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MRPL43Q8N983 215 aaKnown RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 A0A0B4J2A0 478 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TANGO2Q6ICL3 276 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF420Q8TAQ5 688 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LINC01599Q8WXQ3 324 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 C3orf30Q96M34 536 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ALG12Q9BV10 488 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CCDC106Q9BWC9 280 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SHPKQ9UHJ6 478 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TMEM59LQ9UK28 342 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GLI4P10075 376 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UBE2IP63279 158 aaKnown RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MLF2Q15773 248 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MEP1BQ16820 701 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FAM78AQ5JUQ0 283 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SIMC1Q8NDZ2 872 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CITED2Q99967 270 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MAGIXQ9H6Y5 334 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLIT2O94813 1529 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF785A8K8V0 405 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AGAP14A8MT82 685 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PHF1O43189 567 aaPredicted RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MLF1P58340 268 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KCNJ8Q15842 424 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 THNSL2Q86YJ6 484 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DEFB123Q8N688 67 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 C19orf47Q8N9M1 422 aaKnown RBP12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR1J2Q8NGS2 313 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TSSK2Q96PF2 358 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR51E2Q9H255 320 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ALPK2Q86TB3 2170 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ACOD1A6NK06 481 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PMP2P02689 132 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GJA4P35212 333 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CYB561P49447 251 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HLCSP50747 726 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SUOXP51687 545 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CTSCP53634 463 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms