RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FZD2Q14332 565 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ANGPT1Q15389 498 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PDK4Q16654 411 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 FHL5Q5TD97 284 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 TTC23LQ6PF05 361 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 WASH2PQ6VEQ5 465 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ZYG11AQ6WRX3 759 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 RGS9BPQ6ZS82 235 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 Q6ZVQ6 151 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PIGWQ7Z7B1 504 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PARGQ86W56 976 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 NUDCD3Q8IVD9 361 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SLC22A9Q8IVM8 553 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 FAM219AQ8IW50 185 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CPNE9Q8IYJ1 553 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SFRP1Q8N474 314 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 DEFB119Q8N690 84 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 LKAAEAR1Q8TD35 194 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 MCOLN3Q8TDD5 553 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 NAT14Q8WUY8 206 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SKA2Q8WVK7 121 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 DYDC1Q8WWB3 177 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CKAP2Q8WWK9 683 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 OR1E3Q8WZA6 343 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 RIT1Q92963 219 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SNRNP40Q96DI7 357 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 MAGEB18Q96M61 343 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 FOPNLQ96NB1 174 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 OR2M4Q96R27 311 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PAIP2Q9BPZ3 127 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CAPS2Q9BXY5 557 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 OR52A5Q9H2C5 316 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ALG9Q9H6U8 611 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 MARCH7Q9H992 704 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 COG4Q9H9E3 785 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PARVBQ9HBI1 364 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 TM9SF3Q9HD45 589 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SLC23A2Q9UGH3 650 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 EMCNQ9ULC0 261 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CA5BQ9Y2D0 317 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 OARD1Q9Y530 152 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 TDRD6O60522 2096 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 OR5K4A6NMS3 321 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CDC7O00311 574 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 DFNA5O60443 496 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 FCGR3BO75015 233 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 MT-ND2P03891 347 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CATP04040 527 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CSF2P04141 144 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ANXA5P08758 320 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SLC35G4P0C7Q5 338 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 NEFHP12036 1026 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CTSEP14091 401 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 IMPDH1P20839 514 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PBLDP30039 288 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ALDH3A1P30838 453 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SERPINB5P36952 375 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 HSD17B2P37059 387 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ACAA2P42765 397 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 GNPDA1P46926 289 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 DHPSP49366 369 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CSNK1EP49674 416 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 HNMTP50135 292 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 C21orf59P57076 290 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PPIAP62937 165 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PPP1R8Q12972 351 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 STX3Q13277 289 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ELOCQ15369 112 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 TGFBIQ15582 683 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 OR4D1Q15615 310 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 TSNQ15631 228 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PPP1R3AQ16821 1122 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 TPRG1LQ5T0D9 272 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SULT1C3Q6IMI6 304 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 FRA10AC1Q70Z53 315 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 C10orf107Q8IVU9 208 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SLC22A18ASQ8N1D0 253 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 TCAIMQ8N3R3 496 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF75CPQ92670 426 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 TFGQ92734 400 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 NABP1Q96AH0 204 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 RAD51AP1Q96B01 352 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 L3HYPDHQ96EM0 354 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 RBM18Q96H35 190 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CNDP1Q96KN2 507 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 ALKBH7Q9BT30 221 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 GSDMCQ9BYG8 508 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 UBQLN3Q9H347 655 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 RIBC2Q9H4K1 309 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 MRPL40Q9NQ50 206 aaKnown RBP4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 DNAJC11Q9NVH1 559 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 CD274Q9NZQ7 290 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 SPASTQ9UBP0 616 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 EXTL2Q9UBQ6 330 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 B4GALT7Q9UBV7 327 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 KCNN3Q9UGI6 736 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 UBQLN2Q9UHD9 624 aa4.12□□□□□ -1.75
CCDC39-202ENST00000471307 PTBP2Q9UKA9 531 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms