RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 COQ2Q96H96 371 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 ZNF641Q96N77 438 aaPredicted RBP2.97□□□□□ -1.93
SSB-209ENST00000470621 MS4A4EQ96PG1 132 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 RBM14Q96PK6 669 aaKnown RBP2.97□□□□□ -1.93
SSB-209ENST00000470621 ECSITQ9BQ95 431 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 FAIM2Q9BWQ8 316 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 NOX3Q9HBY0 568 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 ADAP2Q9NPF8 381 aa2.97□□□□□ -1.93
SSB-209ENST00000470621 ATP10AO60312 1499 aa2.96□□□□□ -1.93
SSB-209ENST00000470621 H3BNH8 94 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 SCGNO76038 276 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 CD5P06127 495 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 RHOXF2BP0C7M4 288 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 OMGP23515 440 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 CCT3P49368 545 aaKnown RBP2.96□□□□□ -1.94
SSB-209ENST00000470621 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
SSB-209ENST00000470621 Q6ZPB1 254 aaPredicted RBP2.96□□□□□ -1.94
SSB-209ENST00000470621 NCCRP1Q6ZVX7 275 aaPredicted RBP2.96□□□□□ -1.94
SSB-209ENST00000470621 TRIM69Q86WT6 500 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 NUDCD3Q8IVD9 361 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 SCFD1Q8WVM8 642 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 WFIKKN1Q96NZ8 548 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 GABARAPL3Q9BY60 117 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 ZNF222Q9UK12 451 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 ADAM28Q9UKQ2 775 aa2.96□□□□□ -1.94
SSB-209ENST00000470621 MN1Q10571 1320 aaPredicted RBP2.95□□□□□ -1.94
SSB-209ENST00000470621 IGSF9BQ9UPX0 1349 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 A0A1B0GVI7 797 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 CIB4A0PJX0 185 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 BICDL2A1A5D9 508 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 COLCA2A8K830 154 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 ZDHHC11BP0C7U3 371 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 GPR6P46095 362 aaPredicted RBP2.95□□□□□ -1.94
SSB-209ENST00000470621 SUB1P53999 127 aaKnown RBP eCLIP2.95□□□□□ -1.94
SSB-209ENST00000470621 ERVK-25P63136 954 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 SCRN3Q0VDG4 424 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 AQP6Q13520 282 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 DGUOKQ16854 277 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 TTLL9Q3SXZ7 439 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 C5orf47Q569G3 176 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 VAX1Q5SQQ9 334 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 TRIM40Q6P9F5 258 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 STPG2Q8N412 459 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 ZNF615Q8N8J6 731 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 C15orf56Q8N910 161 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 OR5D13Q8NGL4 314 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 MED8Q96G25 268 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 TSGA13Q96PP4 275 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 TM9SF3Q9HD45 589 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 CDH9Q9ULB4 789 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 PACSIN2Q9UNF0 486 aaPredicted RBP2.95□□□□□ -1.94
SSB-209ENST00000470621 CEMIPQ8WUJ3 1361 aa2.95□□□□□ -1.94
SSB-209ENST00000470621 TRAV26-1A0A087WT03 109 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 CCDC182A6NF36 153 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 XKRYO14609 159 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 MAGEB3O15480 346 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 DESP17661 470 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 MAGEA8P43361 318 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 SLC7A9P82251 487 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 FGL1Q08830 312 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 NCBP1Q09161 790 aaKnown RBP2.94□□□□□ -1.94
SSB-209ENST00000470621 STK11Q15831 433 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 DEDD2Q8WXF8 326 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 EXOSC8Q96B26 276 aaKnown RBP2.94□□□□□ -1.94
SSB-209ENST00000470621 C10orf35Q96D05 121 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 COPS8Q99627 209 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 RIOK1Q9BRS2 568 aaKnown RBP2.94□□□□□ -1.94
SSB-209ENST00000470621 TRIM62Q9BVG3 475 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 SIRT7Q9NRC8 400 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 EPS15L1Q9UBC2 864 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 OR12D3Q9UGF7 316 aa2.94□□□□□ -1.94
SSB-209ENST00000470621 MRPS7Q9Y2R9 242 aaKnown RBP2.94□□□□□ -1.94
SSB-209ENST00000470621 MSH6P52701 1360 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 CARMIL3Q8ND23 1372 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 FCMRO60667 390 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 UPK3AO75631 287 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 OR7A10O76100 309 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 PGAM1P18669 254 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 TCN1P20061 433 aaPredicted RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 RPS21P63220 83 aaKnown RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 EXOC3L2Q2M3D2 409 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 C19orf35Q6ZS72 473 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 FAM92BQ6ZTR7 304 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 UTS2BQ765I0 119 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 PGAM4Q8N0Y7 254 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 PUSL1Q8N0Z8 303 aaKnown RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 GPATCH11Q8N954 259 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 ZNF557Q8N988 423 aaPredicted RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 OR5W2Q8NH69 310 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 SDR42E1Q8WUS8 393 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 GEMIN6Q8WXD5 167 aaKnown RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 RPRD1AQ96P16 312 aaPredicted RBP2.93□□□□□ -1.94
SSB-209ENST00000470621 OR2A5Q96R48 311 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 OR8B4Q96RC9 309 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 PANX2Q96RD6 677 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 NDFIP1Q9BT67 221 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 TMEM43Q9BTV4 400 aa2.93□□□□□ -1.94
SSB-209ENST00000470621 PPA2Q9H2U2 334 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms