RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MCCC2Q9HCC0 563 aa11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 MOV10Q9HCE1 1003 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 NRIP3Q9NQ35 241 aa11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 GRHPRQ9UBQ7 328 aa11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 NDRG3Q9UGV2 375 aa11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-204ENST00000469778 GCN1Q92616 2671 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 MCIDASD6RGH6 385 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 TXNDC12O95881 172 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 F13BP05160 661 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 HLA-DOBP13765 273 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ACADSP16219 412 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 MPGP29372 298 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 NTF4P34130 210 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 UGT2B10P36537 528 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ERFP50548 548 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 BIDP55957 195 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 CTXN1P60606 82 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ACKR1Q16570 336 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ARMC4Q5T2S8 1044 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 SFRP5Q5T4F7 317 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ADCK1Q86TW2 530 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 CCDC36Q8IYA8 594 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 GPR137CQ8N3F9 429 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 C17orf78Q8N4C9 275 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ARIH2OSQ8N7S6 290 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 OR52L1Q8NGH7 329 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 MOSPD2Q8NHP6 518 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 KISS1RQ969F8 398 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 RBP7Q96R05 134 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 MRPL13Q9BYD1 178 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 SMURF2Q9HAU4 748 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 TAS2R16Q9NYV7 291 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 CDH10Q9Y6N8 788 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
SPTLC1-204ENST00000469778 TRAV27A0A087WT01 109 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 NKX2-6A6NCS4 301 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 H3BNX3 289 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 PDLIM1O00151 329 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 XKRYO14609 159 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 GOSR1O95249 250 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 IGFBP2P18065 325 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 COX5AP20674 150 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 SELENOPP49908 381 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 CDSNQ15517 529 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 HIST3H3Q16695 136 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 NRN1LQ496H8 165 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 THEM4Q5T1C6 240 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 TSPO2Q5TGU0 170 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 FAHD1Q6P587 224 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 STAC2Q6ZMT1 411 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 ZNF620Q6ZNG0 422 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 PARP8Q8N3A8 854 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 ATG16L2Q8NAA4 619 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 OR9Q2Q8NGE9 314 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 OR6N1Q8NGY5 312 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 FANK1Q8TC84 345 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 ASB10Q8WXI3 467 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 TMEM54Q969K7 222 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 TXNDC15Q96J42 360 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 DACH2Q96NX9 599 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 MUS81Q96NY9 551 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 SNX18Q96RF0 628 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 GPA33Q99795 319 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 KATNB1Q9BVA0 655 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 POLDIP3Q9BY77 421 aaKnown RBP11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 GABARAPL1Q9H0R8 117 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 OR52D1Q9H346 318 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 OBP2BQ9NPH6 170 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 C8orf4Q9NR00 106 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 SLC7A10Q9NS82 523 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 MED29Q9NX70 200 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 GLTPQ9NZD2 209 aa11.15□□□□□ -0.62
SPTLC1-204ENST00000469778 TENM4Q6N022 2769 aa11.15□□□□□ -0.63
SPTLC1-204ENST00000469778 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 TUBAL3A6NHL2 446 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 OSMP13725 252 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF23P17027 643 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 IL32P24001 234 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 SDHAP31040 664 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 CSNK1A1P48729 337 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF133P52736 654 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 IST1P53990 364 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 FAPQ12884 760 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 FAM122BQ7Z309 247 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 DMRTC2Q8IXT2 367 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 MAGEE2Q8TD90 523 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms