RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 SFT2D1Q8WV19 159 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 GHSRQ92847 366 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 GINS4Q9BRT9 223 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 BCL2L10Q9HD36 194 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 EDARQ9UNE0 448 aa12.68□□□□□ -0.38
GPC1-208ENST00000469694 ANKRD20A5PA0PJZ0 165 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 K7ESF4 209 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 GPR31O00270 319 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SNAPINO95295 136 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 ZNF35P13682 527 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 RPA2P15927 270 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 PVALBP20472 110 aaPredicted RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 GPR4P46093 362 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CXCL12P48061 93 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 NRG3P56975 720 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 NXPH1P58417 271 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CEBPEQ15744 281 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CSRP2Q16527 193 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SWI5Q1ZZU3 235 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CCDC157Q569K6 752 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 DMKNQ6E0U4 476 aaPredicted RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 ELP2Q6IA86 826 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FAAP20Q6NZ36 180 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 TMEM64Q6YI46 380 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 VRK2Q86Y07 508 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CADM4Q8NFZ8 388 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 BRIX1Q8TDN6 353 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 ADAP2Q9NPF8 381 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SIT1Q9Y3P8 196 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 IGHV5-51A0A0C4DH38 117 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 DISC1C4P0D8 188 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 F5H5P2 479 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CYR61O00622 381 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 KLF4O43474 513 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SULT1B1O43704 296 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FABP1P07148 127 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CPMP14384 443 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 TLX1P31314 330 aaPredicted RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 CAPZBP47756 277 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FNTBP49356 437 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 TSC22D1Q15714 1073 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FAM74A1Q5RGS3 127 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 GKN2Q86XP6 184 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 OR56A1Q8NGH5 318 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FCAMRQ8WWV6 532 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 DIO2Q92813 273 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CDS1Q92903 461 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 SMAD5Q99717 465 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 GAREM1Q9H706 876 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 MED20Q9H944 212 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 TINAGQ9UJW2 476 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 A0A1B0GVT2 93 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 J3QLW9 94 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 EIF4E2O60573 245 aaKnown RBP12.67□□□□□ -0.38
GPC1-208ENST00000469694 REM1O75628 298 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 VSIG10L2P0DP72 767 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 ZNF19P17023 458 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CNR1P21554 472 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FASLGP48023 281 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 PDX1P52945 283 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 ART1P52961 327 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 ST3GAL3Q11203 375 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CA13Q8N1Q1 262 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 NANPQ8TBE9 248 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 GLYATL2Q8WU03 294 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 SAMD8Q96LT4 415 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 PINK1Q9BXM7 581 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 UBQLN3Q9H347 655 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 FSCN3Q9NQT6 498 aa12.67□□□□□ -0.38
GPC1-208ENST00000469694 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 UBE2QL1A1L167 161 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 SYNDIG1LA6NDD5 238 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
GPC1-208ENST00000469694 ACAA1P09110 424 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 CT62P0C5K7 136 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 NT5EP21589 574 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 KCNJ3P48549 501 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 OR12D2P58182 307 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 FAM199XQ6PEV8 388 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 SLC36A1Q7Z2H8 476 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 CCDC36Q8IYA8 594 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 SVBPQ8N300 66 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 SLC38A1Q9H2H9 487 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms