RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MIER2Q8N344 545 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 IL17RDQ8NFM7 739 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 BBS10Q8TAM1 723 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 SLC41A3Q96GZ6 507 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 TSPAN32Q96QS1 320 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 IKZF5Q9H5V7 419 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 CACYBPQ9HB71 228 aaKnown RBP10.53□□□□□ -0.72
HDAC3-204ENST00000469207 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 DUSP13Q9UII6 198 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 POFUT2Q9Y2G5 429 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF726A6NNF4 738 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 C11orf98E9PRG8 122 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 M0R233 179 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 ZNF500O60304 480 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 AVPP01185 164 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 ARAFP10398 606 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 ETS2P15036 469 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 AQP1P29972 269 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 PRKAR1BP31321 381 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 GLRXP35754 106 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 MAGEB1P43366 347 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 GPR6P46095 362 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 FXNQ16595 210 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 TRMT5Q32P41 509 aaKnown RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 GKAP1Q5VSY0 366 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 ULK3Q6PHR2 472 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 MEX3DQ86XN8 651 aaKnown RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 CCDC36Q8IYA8 594 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 C10orf53Q8N6V4 93 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 DNAJA4Q8WW22 397 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 LRR1Q96L50 414 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 FOXB1Q99853 325 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 RACGAP1Q9H0H5 632 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 OR51B6Q9H340 312 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 MS4A5Q9H3V2 200 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 C12orf10Q9HB07 376 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 MOV10Q9HCE1 1003 aaKnown RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 ZNF275Q9NSD4 429 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 THUMPD1Q9NXG2 353 aaKnown RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 VAPAQ9P0L0 249 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 FBXO9Q9UK97 447 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-204ENST00000469207 NOX1Q9Y5S8 564 aa10.52□□□□□ -0.73
HDAC3-204ENST00000469207 A0A0B4J2E0 115 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 A0A1B0GX12 115 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 B4DSR2 109 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 PLPP3O14495 311 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 PPIHO43447 177 aaKnown RBP10.51□□□□□ -0.73
HDAC3-204ENST00000469207 CDC14BO60729 498 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 FAM157BP0CG42 384 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 EVX1P49640 407 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 CDH12P55289 794 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 BIDP55957 195 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 ERVS71-1P61550 626 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 LMO4P61968 165 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 CDK6Q00534 326 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 FADDQ13158 208 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 GCNT6Q5T4J0 391 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 FAHD2BQ6P2I3 314 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-204ENST00000469207 DHRS4L2Q6PKH6 230 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 MSANTD1Q6ZTZ1 278 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 PAQR4Q8N4S7 273 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-204ENST00000469207 SMYD1Q8NB12 490 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 RDH5Q92781 318 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 SLC35B4Q969S0 331 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 TMEM186Q96B77 213 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 SLC47A1Q96FL8 570 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 FAHD2AQ96GK7 314 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 LRRC37BQ96QE4 947 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 SH3GL3Q99963 347 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 EBF4Q9BQW3 602 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 ASPNQ9BXN1 380 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 ULBP2Q9BZM5 246 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 TMEM27Q9HBJ8 222 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 SLC52A3Q9NQ40 469 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 CCDC167Q9P0B6 97 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
HDAC3-204ENST00000469207 DYSFO75923 2080 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 SLCO1B7G3V0H7 640 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 WIPF1O43516 503 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 AKAP8O43823 692 aaKnown RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 THY1P04216 161 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 ADORA3P0DMS8 318 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 GAAP10253 952 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 SAGP10523 405 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 ACHEP22303 614 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 RBMXP38159 391 aaKnown RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 RGS8P57771 180 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 MAGOHP61326 146 aaKnown RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 GALK2Q01415 458 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 PUDPQ08623 228 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
HDAC3-204ENST00000469207 FAM91A1Q658Y4 838 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 REEP3Q6NUK4 255 aa10.5□□□□□ -0.73
HDAC3-204ENST00000469207 LRFN4Q6PJG9 635 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms