RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 KBTBD11-OT1A0A1B0GTJ5 212 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 SMCO2A6NFE2 343 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 MGRN1O60291 552 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 HUS1O60921 280 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 ZNF780AO75290 641 aaPredicted RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 OTCP00480 354 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 THY1P04216 161 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 ALDOBP05062 364 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 TCN1P20061 433 aaPredicted RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 DCKP27707 260 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 HMOX2P30519 316 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 RORAP35398 523 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 NPBWR2P48146 333 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 MRPL19P49406 292 aaKnown RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 SSR4P51571 173 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 P2RY4P51582 365 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 DLX1P56177 255 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 SELENOTP62341 195 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 KIAA0040Q15053 153 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 HIKESHIQ53FT3 197 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 XKR4Q5GH76 650 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 TMIGD1Q6UXZ0 262 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 Q6ZR54 194 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 LHFPL3Q86UP9 236 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 MMAAQ8IVH4 418 aaKnown RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 LINC00612Q8N6U2 182 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 OR10H4Q8NGA5 316 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 OR2G2Q8NGZ5 317 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 ACOT11Q8WXI4 607 aaPredicted RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 ARHGDIGQ99819 225 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 TMEM246Q9BRR3 403 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 PELOQ9BRX2 385 aaKnown RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 PTGES2Q9H7Z7 377 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 UGT1A10Q9HAW8 530 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 CYP3A43Q9HB55 503 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 MRPL47Q9HD33 250 aaKnown RBP3.05□□□□□ -1.92
SMC4-208ENST00000467468 PRR34Q9NV39 138 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 MARCH5Q9NX47 278 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 AHSPQ9NZD4 102 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 CLN8Q9UBY8 286 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 Q9UF83 564 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 BTNL2Q9UIR0 455 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 TRAF3IP3Q9Y228 551 aa3.05□□□□□ -1.92
SMC4-208ENST00000467468 KCNE1BA0A087WTH5 132 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 TEX46H3BTG2 121 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 TRDMT1O14717 391 aaKnown RBP3.04□□□□□ -1.92
SMC4-208ENST00000467468 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 AGPAT2O15120 278 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 MRPS12O15235 138 aaKnown RBP3.04□□□□□ -1.92
SMC4-208ENST00000467468 FGGP02679 453 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 MYL2P10916 166 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 PRKACAP17612 351 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 SLC2A5P22732 501 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CPN2P22792 545 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 OR3A4PP47883 348 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CX3CR1P49238 355 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 DAOAP59103 153 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 YWHAGP61981 247 aaKnown RBP eCLIP3.04□□□□□ -1.921e-117■■■■■ 400.8
SMC4-208ENST00000467468 RAB11AP62491 216 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CSNK1G2P78368 415 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 ZNF45Q02386 682 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 IRF8Q02556 426 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 ACVR1Q04771 509 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 WDR43Q15061 677 aaKnown RBP eCLIP3.04□□□□□ -1.925e-20■■■■■ 85.2
SMC4-208ENST00000467468 ATP6AP1Q15904 470 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 RAB11BQ15907 218 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 EOGTQ5NDL2 527 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 PRR22Q8IZ63 422 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 PDIK1LQ8N165 341 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 LIX1Q8N485 282 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 EID2Q8N6I1 236 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 OR2AP1Q8NGE2 309 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 RHEBL1Q8TAI7 183 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 MRAPQ8TCY5 172 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 ANKRD49Q8WVL7 239 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 FAM122AQ96E09 287 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CFAP53Q96M91 514 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 EBF4Q9BQW3 602 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 NAT9Q9BTE0 207 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 RIOK2Q9BVS4 552 aaKnown RBP3.04□□□□□ -1.92
SMC4-208ENST00000467468 BLZF1Q9H2G9 400 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CWH43Q9H720 699 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 SH2D2AQ9NP31 389 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CCNB1IP1Q9NPC3 277 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 EXD2Q9NVH0 621 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 QPCTLQ9NXS2 382 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CALYQ9NYX4 217 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 CD274Q9NZQ7 290 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 MOKQ9UQ07 419 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 ASF1AQ9Y294 204 aa3.04□□□□□ -1.92
SMC4-208ENST00000467468 AKNAQ7Z591 1439 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 RBMY1BA6NDE4 496 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 RBMY1EA6NEQ0 496 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 C12orf77C9JDV5 145 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 CDC7O00311 574 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 EEDO75530 441 aaKnown RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 CLPXO76031 633 aa3.03□□□□□ -1.92
SMC4-208ENST00000467468 PLEKP08567 350 aaPredicted RBP3.03□□□□□ -1.92
SMC4-208ENST00000467468 RBMY1DP0C7P1 496 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms