RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PIN1Q13526 163 aaPredicted RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 SLC15A3Q8IY34 581 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 MICU2Q8IYU8 434 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 PFN4Q8NHR9 129 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 RP9Q8TA86 221 aaKnown RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 TMEM255BQ8WV15 326 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 LRR1Q96L50 414 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 KATNB1Q9BVA0 655 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 NOX3Q9HBY0 568 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 NANSQ9NR45 359 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 JMJD1CQ15652 2540 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 SSX4O60224 188 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 ASAH2BP0C7U1 165 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 CBR1P16152 277 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 LSP1P33241 339 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 GYS2P54840 703 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 ZP4Q12836 540 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 C3orf36Q3SXR2 165 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 MDP1Q86V88 176 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 FAM169BQ8N8A8 192 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 REG4Q9BYZ8 158 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 SLC19A3Q9BZV2 496 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 NSRP1Q9H0G5 558 aaKnown RBP18.92■□□□□ 0.62
LIME1-203ENST00000465591 RIMS3Q9UJD0 308 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 ZNF229Q9UJW7 825 aa18.92■□□□□ 0.62
LIME1-203ENST00000465591 RTTNQ86VV8 2226 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 ELOVL7A1L3X0 281 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 ZNF726A6NNF4 738 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 OR5F1O95221 314 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 IDH3GP51553 393 aaPredicted RBP18.91■□□□□ 0.62
LIME1-203ENST00000465591 SEC24CP53992 1094 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 TAS2R41P59536 307 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 GNGT1P63211 74 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 HGFACQ04756 655 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 MELKQ14680 651 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 SWI5Q1ZZU3 235 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 C8orf82Q6P1X6 216 aaPredicted RBP18.91■□□□□ 0.62
LIME1-203ENST00000465591 SLC35D2Q76EJ3 337 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 OR6N1Q8NGY5 312 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 FBXO17Q96EF6 278 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 ADAD1Q96M93 576 aaKnown RBP18.91■□□□□ 0.62
LIME1-203ENST00000465591 ULBP2Q9BZM5 246 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 BARX1Q9HBU1 254 aaPredicted RBP18.91■□□□□ 0.62
LIME1-203ENST00000465591 C20orf141Q9NUB4 165 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 B3GNT2Q9NY97 397 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 FAM53CQ9NYF3 392 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 ZNF224Q9NZL3 707 aa18.91■□□□□ 0.62
LIME1-203ENST00000465591 YLPM1P49750 1951 aaKnown RBP18.91■□□□□ 0.62
LIME1-203ENST00000465591 GMNCA6NCL1 334 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 H7C417 338 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 NME4O00746 187 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 OR6A2O95222 327 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 HLA-HP01893 362 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 CRYAAP02489 173 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 MT-ND1P03886 318 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 B4GALT1P15291 398 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 CSNK1A1P48729 337 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 LSM11P83369 360 aaKnown RBP eCLIP18.9■□□□□ 0.62
LIME1-203ENST00000465591 LIPEQ05469 1076 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 NPRL3Q12980 569 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 KRTAP21-3Q3LHN1 58 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 ZNF627Q7L945 461 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 OR6X1Q8NH79 312 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 TMEM54Q969K7 222 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 TPD52L3Q96J77 140 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 ELAC2Q9BQ52 826 aaKnown RBP18.9■□□□□ 0.62
LIME1-203ENST00000465591 CA10Q9NS85 328 aa18.9■□□□□ 0.62
LIME1-203ENST00000465591 CHD3Q12873 2000 aaKnown RBP18.9■□□□□ 0.62
LIME1-203ENST00000465591 IGHV4-30-2A0A087WSY4 118 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 RNF13O43567 381 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 CCDC22O60826 627 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 LY6HO94772 140 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 IFNA14P01570 189 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 UMPSP11172 480 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 PAX7P23759 505 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 CAPZA2P47755 286 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 SLC7A2P52569 658 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 NUDT6P53370 316 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 VHLLQ6RSH7 139 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 ZNF813Q6ZN06 617 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 NANOGNBQ7Z5D8 188 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 VTCN1Q7Z7D3 282 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 CPLX4Q7Z7G2 160 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 ZNF75AQ96N20 296 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 KCNS3Q9BQ31 491 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 B3GAT2Q9NPZ5 323 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 A4GNTQ9UNA3 340 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 POFUT2Q9Y2G5 429 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 SNX13Q9Y5W8 968 aa18.89■□□□□ 0.61
LIME1-203ENST00000465591 IGHV2OR16-5A0A0B4J2B6 119 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 PIP5K1CO60331 668 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 OR7A10O76100 309 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 FUT1P19526 365 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 PCSK6P29122 969 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 RBM34P42696 430 aaKnown RBP18.88■□□□□ 0.61
LIME1-203ENST00000465591 SELENOWP63302 87 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 RUNX1T1Q06455 604 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 RPL18Q07020 188 aaKnown RBP18.88■□□□□ 0.61
LIME1-203ENST00000465591 RAB35Q15286 201 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 ADIPOQQ15848 244 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms