RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ST7LQ8TDW4 575 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 TIMD4Q96H15 378 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 PRPF18Q99633 342 aaKnown RBP12.64□□□□□ -0.39
HDAC6-214ENST00000465269 NPHS2Q9NP85 383 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 EXOSC3Q9NQT5 275 aaKnown RBP12.64□□□□□ -0.39
HDAC6-214ENST00000465269 A0A1B0GUS0 222 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 NGFP01138 241 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 B4GALT1P15291 398 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF12P17014 697 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 CXCR1P25024 350 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 SLC18A1P54219 525 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
HDAC6-214ENST00000465269 HFEQ30201 348 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 C11orf87Q6NUJ2 197 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF584Q8IVC4 421 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 PARP8Q8N3A8 854 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 OR52E2Q8NGJ4 325 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 ROPN1LQ96C74 230 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 SLC25A36Q96CQ1 311 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 METTL2AQ96IZ6 378 aaKnown RBP12.63□□□□□ -0.39
HDAC6-214ENST00000465269 C1orf50Q9BV19 199 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 TAPBPLQ9BX59 468 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 CHIAQ9BZP6 476 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 PIF1Q9H611 641 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-214ENST00000465269 DECR2Q9NUI1 292 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 RCE1Q9Y256 329 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
HDAC6-214ENST00000465269 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF99A8MXY4 864 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-214ENST00000465269 TMEM233B4DJY2 109 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 H3BQF6 201 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 BIRC5O15392 142 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 FOXH1O75593 365 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 KRT34O76011 436 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 AK1P00568 194 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 PNMTP11086 282 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 BGNP21810 368 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 CD80P33681 288 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 MTNR1AP48039 350 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-214ENST00000465269 LSM12Q3MHD2 195 aaKnown RBP12.62□□□□□ -0.39
HDAC6-214ENST00000465269 VAX1Q5SQQ9 334 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-214ENST00000465269 BRD3OSQ6XYD6 125 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 OR2M2Q96R28 347 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 SLC6A13Q9NSD5 602 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 B3GAT1Q9P2W7 334 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 RASD1Q9Y272 281 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 RNF114Q9Y508 228 aa12.62□□□□□ -0.39
HDAC6-214ENST00000465269 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 PPIAL4CA0A0B4J2A2 164 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 SPRY3O43610 288 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 VAMP5O95183 116 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 IGHMP01871 453 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 CRYBA1P05813 215 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 KLF3P57682 345 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-214ENST00000465269 RAB1AP62820 205 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 TEKQ02763 1124 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 EPS8Q12929 822 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 PCGF3Q3KNV8 242 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 GPAT3Q53EU6 434 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 TMEM255AQ5JRV8 349 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 SYNPRQ8TBG9 265 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 SNX33Q8WV41 574 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 MOAP1Q96BY2 351 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
HDAC6-214ENST00000465269 EMC6Q9BV81 110 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 EXD2Q9NVH0 621 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 EGFL7Q9UHF1 273 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 PLXNB1O43157 2135 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 DSPPQ9NZW4 1301 aa12.61□□□□□ -0.39
HDAC6-214ENST00000465269 TRAV40A0A0B4J280 105 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 DUXAA6NLW8 204 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ITM2AO43736 263 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 NPHS1O60500 1241 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 NDUFA7O95182 113 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 LCKP06239 509 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 CHRNGP07510 517 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 SBK2P0C263 348 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF43P17038 809 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 NAA20P61599 178 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms