RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GNGT2O14610 69 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 CLOCKO15516 846 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 TRAF3IP2O43734 574 aaPredicted RBP14.97□□□□□ -0.01
VPS52-215ENST00000464425 DEAF1O75398 565 aaPredicted RBP14.97□□□□□ -0.01
VPS52-215ENST00000464425 ZNF432O94892 652 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 HIST1H2ABP04908 130 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 ASAH2BP0C7U1 165 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 FCGR1AP12314 374 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 IFI30P13284 250 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 MPGP29372 298 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 LSM11P83369 360 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS52-215ENST00000464425 PPA1Q15181 289 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 SEC23BQ15437 767 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 GABRA6Q16445 453 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 TIMM23BQ5SRD1 257 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 CARD17Q5XLA6 110 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 TMPRSS11FQ6ZWK6 438 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 HIST3H2AQ7L7L0 130 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 LINGO2Q7L985 606 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 SLC46A3Q7Z3Q1 461 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 OR4K5Q8NGD3 323 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 HIST1H2ACQ93077 130 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 MUS81Q96NY9 551 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 ALKBH3Q96Q83 286 aaPredicted RBP14.97□□□□□ -0.01
VPS52-215ENST00000464425 EMC6Q9BV81 110 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 MED29Q9NX70 200 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 TAS2R5Q9NYW4 299 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 ST6GALNAC2Q9UJ37 374 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 RCE1Q9Y256 329 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 TMEM5Q9Y2B1 443 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 ANKRD17O75179 2603 aaKnown RBP14.97□□□□□ -0.01
VPS52-215ENST00000464425 ROS1P08922 2347 aa14.97□□□□□ -0.01
VPS52-215ENST00000464425 ZNF587BE7ETH6 402 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 PIP5K1CO60331 668 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 SLC43A1O75387 559 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 TIPRLO75663 272 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 OR7A10O76100 309 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 PLAUP00749 431 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 FUT1P19526 365 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 IFNGR2P38484 337 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 OMPP47874 163 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 ANKDD1AQ495B1 522 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 OR7E24Q6IFN5 339 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 PXKQ7Z7A4 578 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 P2RY8Q86VZ1 359 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 OR2M2Q96R28 347 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 UBTD1Q9HAC8 227 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 NGBQ9NPG2 151 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 SAMHD1Q9Y3Z3 626 aaKnown RBP14.96□□□□□ -0.01
VPS52-215ENST00000464425 NOX1Q9Y5S8 564 aa14.96□□□□□ -0.01
VPS52-215ENST00000464425 MYO9AB2RTY4 2548 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 OR6C65A6NJZ3 312 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ZNF726A6NNF4 738 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ANKRD65E5RJM6 399 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 BLOC1S5-TXNDC5H3BN57 136 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 RNF13O43567 381 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 AKAP8O43823 692 aaKnown RBP14.95□□□□□ -0.02
VPS52-215ENST00000464425 ENTPD5O75356 428 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 TSPAN19P0C672 248 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 IFNGR1P15260 489 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 FASP25445 335 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 SLC9A3P48764 834 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 IST1P53990 364 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 NR1H2P55055 460 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ROR2Q01974 943 aaKnown RBP14.95□□□□□ -0.02
VPS52-215ENST00000464425 TGFBR3Q03167 851 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ZP4Q12836 540 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ATP6AP1Q15904 470 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 MICAQ29983 383 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 HMBOX1Q6NT76 420 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 C1orf94Q6P1W5 598 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 SEZ6L2Q6UXD5 910 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 NHLRC1Q6VVB1 395 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 ABHD12BQ7Z5M8 362 aaPredicted RBP14.95□□□□□ -0.02
VPS52-215ENST00000464425 MEX3DQ86XN8 651 aaKnown RBP14.95□□□□□ -0.02
VPS52-215ENST00000464425 WDFY1Q8IWB7 410 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 GPR137CQ8N3F9 429 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 WDR31Q8NA23 367 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 PYDC1Q8WXC3 89 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 C1QTNF6Q9BXI9 259 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 LINC00470Q9BZP3 86 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 VNN3Q9NY84 501 aa14.95□□□□□ -0.02
VPS52-215ENST00000464425 SLC35F4A4IF30 521 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 DPRXA6NFQ7 191 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 EFCAB9A8MZ26 197 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 M0R3G1 203 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 RRP9O43818 475 aaKnown RBP14.94□□□□□ -0.02
VPS52-215ENST00000464425 OR10H3O60404 316 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 CCNB2O95067 398 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 MAKP20794 623 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 DNASE1P24855 282 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 CAMK2DQ13557 499 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 KEAP1Q14145 624 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 HIKESHIQ53FT3 197 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 PHYHD1Q5SRE7 291 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 NCMAPQ5T1S8 102 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 ZNF770Q6IQ21 691 aaPredicted RBP14.94□□□□□ -0.02
VPS52-215ENST00000464425 PAMR1Q6UXH9 720 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 ZNF704Q6ZNC4 412 aaPredicted RBP14.94□□□□□ -0.02
VPS52-215ENST00000464425 NANOGNBQ7Z5D8 188 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 455.7 ms