RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CCDC167Q9P0B6 97 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 SPEF1Q9Y4P9 236 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 ANGPT2O15123 496 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 NCR1O76036 304 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 ZNF432O94892 652 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 GSNP06396 782 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CBR1P16152 277 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CXCR1P25024 350 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 IL12AP29459 219 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CHI3L1P36222 383 aaPredicted RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 MRPL19P49406 292 aaKnown RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 NME5P56597 212 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 ACTG1P63261 375 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 HPCAP84074 193 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 TRAP1Q12931 704 aaKnown RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 SAMD4BQ5PRF9 694 aaKnown RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 C1orf140Q5VVS0 124 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 TMEM225Q6GV28 225 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 OGFOD2Q6N063 350 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CMIPQ8IY22 773 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 CADM2Q8N3J6 435 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 FAM169BQ8N8A8 192 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 HIPK4Q8NE63 616 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 RSPO3Q9BXY4 272 aaPredicted RBP13.49□□□□□ -0.25
SND1-203ENST00000463020 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 TREM2Q9NZC2 230 aa13.49□□□□□ -0.25
SND1-203ENST00000463020 TMEM89A2RUT3 159 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 CDHR4A6H8M9 788 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 PNMTP11086 282 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 ALDH3B1P43353 468 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 CLDN17P56750 224 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 HOXC5Q00444 222 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 EGR4Q05215 589 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 SPATS1Q496A3 300 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 COQ5Q5HYK3 327 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 RPS26P11Q5JNZ5 115 aaPredicted RBP13.48□□□□□ -0.25
SND1-203ENST00000463020 PRAMEF8Q5VWM4 474 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 PRAMEF7Q5VXH5 474 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
SND1-203ENST00000463020 GLCCI1Q86VQ1 547 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 TMEM186Q96B77 213 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 TESCQ96BS2 214 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 ZNF75AQ96N20 296 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 HOPXQ9BPY8 73 aaPredicted RBP13.48□□□□□ -0.25
SND1-203ENST00000463020 ECSITQ9BQ95 431 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 SYT3Q9BQG1 590 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 LINC00470Q9BZP3 86 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 DPY30Q9C005 99 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 PIF1Q9H611 641 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 CRLF2Q9HC73 371 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 FZR1Q9UM11 496 aa13.48□□□□□ -0.25
SND1-203ENST00000463020 DSPPQ9NZW4 1301 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 A8MVM7 634 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 B4DSR2 109 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 HLA-HP01893 362 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 IL7RP16871 459 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 ERFP50548 548 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 MVDP53602 400 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 DAG1Q14118 895 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 CEACAM16Q2WEN9 425 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 PEG10Q86TG7 708 aaKnown RBP13.47□□□□□ -0.25
SND1-203ENST00000463020 BHLHE22Q8NFJ8 381 aaPredicted RBP13.47□□□□□ -0.25
SND1-203ENST00000463020 ZFAND2BQ8WV99 257 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 ASB9Q96DX5 294 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 KTI12Q96EK9 354 aaPredicted RBP13.47□□□□□ -0.25
SND1-203ENST00000463020 LRGUKQ96M69 825 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 ESM1Q9NQ30 184 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
SND1-203ENST00000463020 B3GNT2Q9NY97 397 aa13.47□□□□□ -0.25
SND1-203ENST00000463020 CCDC154A6NI56 674 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 FBP2O00757 339 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 CASQ2O14958 399 aaPredicted RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 MSMBP08118 114 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 TFPTP0C1Z6 253 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 GAAP10253 952 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 NR4A1P22736 598 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 RPS5P46782 204 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 MAP2K6P52564 334 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 HILS1P60008 231 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 UFM1P61960 85 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 LMO4P61968 165 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 MAD2L1Q13257 205 aaPredicted RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
SND1-203ENST00000463020 ANXA8L1Q5VT79 327 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 SERPINA11Q86U17 422 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 SPATA24Q86W54 205 aa13.46□□□□□ -0.25
SND1-203ENST00000463020 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms