RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 B3GNT2Q9NY97 397 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 ADAM21Q9UKJ8 722 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 SLC7A7Q9UM01 511 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 USP22Q9UPT9 525 aa16.44■□□□□ 0.22
VARS-220ENST00000461874 ATRQ13535 2644 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 SERPINI2O75830 405 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 CH25HO95992 272 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 NPPAP01160 153 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 CAPZA2P47755 286 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 ZP4Q12836 540 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 KLF10Q13118 480 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 EFNB3Q15768 340 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 VHLLQ6RSH7 139 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 ZNF627Q7L945 461 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 OR6N1Q8NGY5 312 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 SORCS2Q96PQ0 1159 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 ECSITQ9BQ95 431 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 ZNF426Q9BUY5 554 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 SLC19A3Q9BZV2 496 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 PLK3Q9H4B4 646 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 SAR1AQ9NR31 198 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 TAS2R5Q9NYW4 299 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 POFUT2Q9Y2G5 429 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 DNHD1Q96M86 4753 aa16.43■□□□□ 0.22
VARS-220ENST00000461874 IGHV2OR16-5A0A0B4J2B6 119 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 BBIP1A8MTZ0 92 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 C11orf98E9PRG8 122 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 OR6A2O95222 327 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 HLA-HP01893 362 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 IFNGR1P15260 489 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 NPRL3Q12980 569 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 TMEM249Q2WGJ8 235 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 MMEL1Q495T6 779 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 CGB2Q6NT52 195 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 ZNF813Q6ZN06 617 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 SLC46A3Q7Z3Q1 461 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 SNX32Q86XE0 403 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 IL17RDQ8NFM7 739 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 PROX1Q92786 737 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 ULBP2Q9BZM5 246 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 ZNF442Q9H7R0 627 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 NANSQ9NR45 359 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 FKBP7Q9Y680 259 aa16.42■□□□□ 0.22
VARS-220ENST00000461874 KPNA4O00629 521 aaPredicted RBP16.41■□□□□ 0.22
VARS-220ENST00000461874 MRASO14807 208 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 THBS4P35443 961 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 CSNK1A1P48729 337 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 BIDP55957 195 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 SF3A3Q12874 501 aaKnown RBP eCLIP16.41■□□□□ 0.225e-6■■■■■ 39.5
VARS-220ENST00000461874 REP15Q6BDI9 236 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 SLC35D2Q76EJ3 337 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 CARM1Q86X55 608 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 LRRC17Q8N6Y2 441 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 OR6X1Q8NH79 312 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 ZNF583Q96ND8 569 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 PRSS27Q9BQR3 290 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 NOX3Q9HBY0 568 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 ZNF229Q9UJW7 825 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 BAG5Q9UL15 447 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 SH3GLB1Q9Y371 365 aa16.41■□□□□ 0.22
VARS-220ENST00000461874 VSTM5A8MXK1 200 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 HIST1H2ABP04908 130 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 VIMP08670 466 aaKnown RBP16.4■□□□□ 0.22
VARS-220ENST00000461874 ASAH2BP0C7U1 165 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 CD79AP11912 226 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 B4GALT1P15291 398 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 NPR2P20594 1047 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 PDLIM4P50479 330 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 VLDLRP98155 873 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 GSG1Q2KHT4 349 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 ERICH5Q6P6B1 374 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 HIST3H2AQ7L7L0 130 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 ANKS4BQ8N8V4 417 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 HIST1H2ACQ93077 130 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 TMEM54Q969K7 222 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 ZNF75AQ96N20 296 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 FOXB1Q99853 325 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 VRK1Q99986 396 aaPredicted RBP16.4■□□□□ 0.22
VARS-220ENST00000461874 MEPEQ9NQ76 525 aaPredicted RBP16.4■□□□□ 0.22
VARS-220ENST00000461874 ZNF446Q9NWS9 450 aa16.4■□□□□ 0.22
VARS-220ENST00000461874 FBXO9Q9UK97 447 aaPredicted RBP16.4■□□□□ 0.22
VARS-220ENST00000461874 LOC100653049A0A140TA62 436 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 A8MV72 311 aaPredicted RBP16.39■□□□□ 0.21
VARS-220ENST00000461874 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 RNF13O43567 381 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 KRT34O76011 436 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 USF1P22415 310 aaPredicted RBP16.39■□□□□ 0.21
VARS-220ENST00000461874 PPOXP50336 477 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 PIGFQ07326 219 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 HIPK1Q86Z02 1210 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 PCYOX1LQ8NBM8 494 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 C10orf82Q8WW14 230 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 DOK1Q99704 481 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 DENND2DQ9H6A0 471 aaPredicted RBP16.39■□□□□ 0.21
VARS-220ENST00000461874 GLTPQ9NZD2 209 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 ZNF224Q9NZL3 707 aa16.39■□□□□ 0.21
VARS-220ENST00000461874 CHD3Q12873 2000 aaKnown RBP16.39■□□□□ 0.21
VARS-220ENST00000461874 TMEM129A0AVI4 362 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 hCG_2039718K7EN88 272 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms