RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ISXQ2M1V0 245 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MRGPRG-AS1Q2M3A8 158 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 KRT71Q3SY84 523 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 VPS26BQ4G0F5 336 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF772Q68DY9 489 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 MARCH9Q86YJ5 346 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 LRRC49Q8IUZ0 686 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CCDC65Q8IXS2 484 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MCOLN2Q8IZK6 566 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SLC22A18ASQ8N1D0 253 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MTURNQ8N3F0 131 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 C4orf32Q8N8J7 132 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 B3GNT7Q8NFL0 401 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 KIFAP3Q92845 792 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CXorf40BQ96DE9 158 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CERS2Q96G23 380 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF641Q96N77 438 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 DUX3Q96PT4 197 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SLC35A5Q9BS91 424 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 RAB34Q9BZG1 259 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ROGDIQ9GZN7 287 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PPDPFQ9H3Y8 114 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 TUBB1Q9H4B7 451 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SYNDIG1Q9H7V2 258 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 CCNB1IP1Q9NPC3 277 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SAMSN1Q9NSI8 373 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 LYARQ9NX58 379 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 CTSZQ9UBR2 303 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MUTYHQ9UIF7 546 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 COL22A1Q8NFW1 1626 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 PHRF1Q9P1Y6 1649 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 PXDNQ92626 1479 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 NEO1Q92859 1461 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CCDC88AQ3V6T2 1871 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 NUP188Q5SRE5 1749 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 BCORQ6W2J9 1755 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 A0A1W2PPV4 95 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CCT8L1PA6NM43 557 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 PP2D1A8MPX8 630 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 A8MXQ7 604 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TRDCB7Z8K6 153 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 K7ERQ8 282 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 NDUFAB1O14561 156 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 BCKDKO14874 412 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 YKT6O15498 198 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 LATO43561 262 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 PSTPIP1O43586 416 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CHMP2AO43633 222 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 OR10H3O60404 316 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 NMT2O60551 498 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 UGT2B17O75795 530 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 GNA14O95837 355 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 SNAI1O95863 264 aaPredicted RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 MELTFP08582 738 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TRIM49P0CI25 452 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TRIM49CP0CI26 452 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CT45A10P0DMU9 189 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 HSPD1P10809 573 aaKnown RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 PRKACBP22694 351 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 RRM2P31350 389 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 DAP3P51398 398 aaKnown RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 ZFP36L1Q07352 338 aaKnown RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 KCNJ11Q14654 390 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 KRTAP24-1Q3LI83 254 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TTMPQ5BVD1 217 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 ZNF506Q5JVG8 444 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 MLIPQ5VWP3 458 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 LEMD1Q68G75 181 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 ADAM5Q6NVV9 412 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 VRK2Q86Y07 508 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 MFSD6LQ8IWD5 586 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TCAIMQ8N3R3 496 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 TRIML2Q8N7C3 387 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 OR6T1Q8NGN1 323 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 LKAAEAR1Q8TD35 194 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 DTX3LQ8TDB6 740 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 OR1E3Q8WZA6 343 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 RAB1CQ92928 201 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 MS4A14Q96JA4 679 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 RNF2Q99496 336 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 ZNF670Q9BS34 389 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 BARHL1Q9BZE3 327 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 SMYD3Q9H7B4 428 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 NIPAL2Q9H841 368 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 PXMP2Q9NR77 195 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CUTCQ9NTM9 273 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 ARMCX1Q9P291 453 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 WARS2Q9UGM6 360 aaKnown RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 BZW2Q9Y6E2 419 aaKnown RBP2.35□□□□□ -2.03
HPS3-203ENST00000460822 CAMTA1Q9Y6Y1 1673 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 CPDO75976 1380 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 DOCK2Q92608 1830 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 KIF13BQ9NQT8 1826 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 LRP6O75581 1613 aa2.35□□□□□ -2.03
HPS3-203ENST00000460822 ALS2Q96Q42 1657 aa2.34□□□□□ -2.03
HPS3-203ENST00000460822 KLF18A0A0U1RQI7 1052 aa2.34□□□□□ -2.03
HPS3-203ENST00000460822 IQANK1A0A1B0GTG1 560 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms