RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C20orf196Q8IYI0 205 aa16.34■□□□□ 0.21
USP39-209ENST00000458268 BCL2L2Q92843 193 aaPredicted RBP16.34■□□□□ 0.21
USP39-209ENST00000458268 CXXC4Q9H2H0 198 aa16.34■□□□□ 0.21
USP39-209ENST00000458268 CXorf56Q9H5V9 222 aa16.34■□□□□ 0.21
USP39-209ENST00000458268 MGAT4BQ9UQ53 548 aa16.34■□□□□ 0.21
USP39-209ENST00000458268 FAM32AQ9Y421 112 aaKnown RBP16.34■□□□□ 0.21
USP39-209ENST00000458268 ARID1AO14497 2285 aa16.34■□□□□ 0.21
USP39-209ENST00000458268 A0A1W2PRG6 482 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 ATP6V1G2-DDX39BF2Z307 99 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 DIRAS1O95057 198 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 FAM107AO95990 144 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 BCL10O95999 233 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 ASAH2BP0C7U1 165 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 THRBP10828 461 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 CD99P14209 185 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 CDKN1AP38936 164 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 RPS4XP62701 263 aaKnown RBP16.33■□□□□ 0.2
USP39-209ENST00000458268 ADAM8P78325 824 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 MYBPC1Q00872 1141 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 FGD3Q5JSP0 725 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 SAMD4BQ5PRF9 694 aaKnown RBP16.33■□□□□ 0.2
USP39-209ENST00000458268 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 NRMQ8IXM6 262 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 OFCC1Q8IZS5 231 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 FITM2Q8N6M3 262 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 FAM86B1Q8N7N1 296 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 MOSPD2Q8NHP6 518 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 SAMD4AQ9UPU9 718 aaKnown RBP16.33■□□□□ 0.2
USP39-209ENST00000458268 MOKQ9UQ07 419 aa16.33■□□□□ 0.2
USP39-209ENST00000458268 TEP1Q99973 2627 aaKnown RBP16.32■□□□□ 0.2
USP39-209ENST00000458268 B2RBV5 119 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 ARHGEF9O43307 516 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 SOD3P08294 240 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 CD79AP11912 226 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 B4GALT1P15291 398 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 PTH2RP49190 550 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 CLRN1P58418 232 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 USF3Q68DE3 2245 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 ZNF813Q6ZN06 617 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 RRM2BQ7LG56 351 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 IGFN1Q86VF2 1251 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 ZNF566Q969W8 418 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 BPIFA2Q96DR5 249 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 NELFAQ9H3P2 528 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 INIPQ9NRY2 104 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 NDE1Q9NXR1 346 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 MAGEL2Q9UJ55 1249 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 ENPP4Q9Y6X5 453 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 ITPR3Q14573 2671 aa16.32■□□□□ 0.2
USP39-209ENST00000458268 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 ZNF99A8MXY4 864 aaPredicted RBP16.31■□□□□ 0.2
USP39-209ENST00000458268 E7EQL1 145 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 RPL36A-HNRNPH2H7BZ11 118 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 FFAR1O14842 300 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 ARPC2O15144 300 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 GPR4P46093 362 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 FABP6P51161 128 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 IDH3GP51553 393 aaPredicted RBP16.31■□□□□ 0.2
USP39-209ENST00000458268 ATP5J2P56134 94 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 ZP4Q12836 540 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 LAPTM4AQ15012 233 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 TBPL2Q6SJ96 375 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 B3GLCTQ6Y288 498 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 YTHDF3Q7Z739 585 aaKnown RBP16.31■□□□□ 0.2
USP39-209ENST00000458268 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 SYT14Q8NB59 555 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 OR51A7Q8NH64 312 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 HTRA1Q92743 480 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 NSL1Q96IY1 281 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 ADAD1Q96M93 576 aaKnown RBP16.31■□□□□ 0.2
USP39-209ENST00000458268 NSMCE2Q96MF7 247 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 SLC38A2Q96QD8 506 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 PIP5K1AQ99755 562 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 SEC61A2Q9H9S3 476 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 MAN2C1Q9NTJ4 1040 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 FAIMQ9NVQ4 179 aa16.31■□□□□ 0.2
USP39-209ENST00000458268 TRAV27A0A087WT01 109 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 EFCAB9A8MZ26 197 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 CELA3BP08861 270 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 MAKP20794 623 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 MNAT1P51948 309 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 PIGFQ07326 219 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 KRT72Q14CN4 511 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 ALG10Q5BKT4 473 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 VHLLQ6RSH7 139 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 CDK20Q8IZL9 346 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 OR13C2Q8NGS9 318 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 OR52J3Q8NH60 311 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 OR6X1Q8NH79 312 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 Q96MF0 132 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 OBP2BQ9NPH6 170 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 DCAF13Q9NV06 445 aaKnown RBP16.3■□□□□ 0.2
USP39-209ENST00000458268 GLTPQ9NZD2 209 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
USP39-209ENST00000458268 CELSR1Q9NYQ6 3014 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 A0A087WUU8 490 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 ARPC4-TTLL3A0A0A6YYG9 625 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 IGHG1P01857 330 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 HLA-HP01893 362 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 H1F0P07305 194 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms