RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MRPS16Q9Y3D3 137 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MT-ND4P03905 459 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 NCK1P16333 377 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ELK4P28324 431 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 EEF1A2Q05639 463 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 FCRLBQ6BAA4 426 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR6S1Q8NH40 331 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 KHSRPQ92945 711 aaKnown RBP eCLIP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PITX2Q99697 317 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR2S2Q9NQN1 319 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TAS2R5Q9NYW4 299 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PSORS1C1Q9UIG5 152 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CSNK1G3Q9Y6M4 447 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SLC22A20A6NK97 555 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PSMD9O00233 223 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 GPX2P18283 190 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MDH2P40926 338 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CCR6P51684 374 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 RRADP55042 308 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SHC2P98077 582 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ATP6V1FQ16864 119 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TFAP2EQ6VUC0 442 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 UBALD1Q8TB05 177 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 RNF2Q99496 336 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 LYRM4Q9HD34 91 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ACSS2Q9NR19 701 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MYEF2Q9P2K5 600 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CPA4Q9UI42 421 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SNED1Q8TER0 1413 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ANKRD11Q6UB99 2663 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CYTIPO60759 359 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PNPP00491 289 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PRR22Q8IZ63 422 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ARFGAP1Q8N6T3 406 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ACVR1CQ8NER5 493 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ACER1Q8TDN7 264 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SLCO4A1Q96BD0 722 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF681Q96N22 645 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SPNS1Q9H2V7 528 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR51I2Q9H344 312 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 DUSP21Q9H596 190 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF225Q9UK10 706 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 LOC285556D6RIA3 1793 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR5H14A6NHG9 310 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR5H1A6NKK0 313 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 YJEFN3A6XGL0 299 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 LGALS8O00214 317 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TBPL1P62380 186 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 EIF3IQ13347 325 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PGGHGQ32M88 737 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SLC10A6Q3KNW5 377 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TEX30Q5JUR7 227 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 COMMD6Q7Z4G1 85 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR6N2Q8NGY6 317 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 PSMF1Q92530 271 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 BORCS6Q96GS4 357 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 KCNA7Q96RP8 456 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SH3BGRL3Q9H299 93 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TAF9BQ9HBM6 251 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF226Q9NYT6 803 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF705GA8MUZ8 300 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 C6orf47O95873 294 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MBPP02686 304 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ERVK-25P63136 954 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ADARB1P78563 741 aaKnown RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ELOBQ15370 118 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 VITQ6UXI7 678 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 HUS1BQ8NHY5 278 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR7D2Q96RA2 312 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 RANGRFQ9HD47 186 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MCRIP1C9JLW8 97 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 MT-CYBP00156 380 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF136P52737 540 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 CASP9P55211 416 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 OR4C11Q6IEV9 310 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 SYNPRQ8TBG9 265 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 TMED3Q9Y3Q3 217 aa4.85□□□□□ -1.63
CSMD3-204ENST00000455883 DENND4AQ7Z401 1863 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 TEX50A0A1B0GTY4 177 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SLC38A8A6NNN8 435 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 GPR25O00155 361 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SOCS2O14508 198 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 DOK2O60496 412 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CST2P09228 141 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 KCNQ1P51787 676 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 FAM3BP58499 235 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 RGNQ15493 299 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SLC16A14Q7RTX9 510 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF610Q8N9Z0 462 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 LKAAEAR1Q8TD35 194 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM239Q8WW34 195 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 F2RL3Q96RI0 385 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ATG10Q9H0Y0 220 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 MIR1-1HGQ9H1L0 117 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 METTL17Q9H7H0 456 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF629Q9UEG4 869 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 NRXN3Q9Y4C0 1643 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ADAMTS9Q9P2N4 1935 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms