RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 STACQ99469 402 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 CITED1Q99966 193 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 C1QTNF5Q9BXJ0 243 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 ACPTQ9BZG2 426 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 TREM2Q9NZC2 230 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 RNF14Q9UBS8 474 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 NFU1Q9UMS0 254 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 JRKLQ9Y4A0 524 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 FLVCR1Q9Y5Y0 555 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 RYR2Q92736 4967 aa3.13□□□□□ -1.91
RBM39-220ENST00000455343 DNAH3Q8TD57 4116 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 A0A096LPK6 155 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 A0A1B0GUS0 222 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SH3PXD2BA1X283 911 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 VSTM5A8MXK1 200 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 H3BNH8 94 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SOCS2O14508 198 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 EIF3HO15372 352 aaKnown RBP eCLIP3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZNF264O43296 627 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SYNGR3O43761 229 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 EIF4E2O60573 245 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 TBX19O60806 448 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 MPZL1O95297 269 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 NUDT14O95848 222 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KRT6AP02538 564 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KRT6BP04259 564 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ADRA2AP08913 450 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 GSTA2P09210 222 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 RBP1P09455 135 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TSPAN8P19075 237 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ATP5F1P24539 256 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 FPR3P25089 353 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 FKBP2P26885 142 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 NTSP30990 170 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ARL1P40616 181 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 MAGEA8P43361 318 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 MAGEA12P43365 314 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KRT6CP48668 564 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CLK1P49759 484 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 HTR6P50406 440 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ATP12AP54707 1039 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 GUCY2DQ02846 1103 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 C2orf80Q0P641 193 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZP4Q12836 540 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SKP2Q13309 424 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CBFBQ13951 182 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KIAA0040Q15053 153 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SLC9A3R2Q15599 337 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 NDUFAF6Q330K2 333 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZIK1Q3SY52 487 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 RNASE12Q5GAN4 147 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 KHDC1LQ5JSQ8 128 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KLF17Q5JT82 389 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 KPRPQ5T749 579 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 SAXO2Q658L1 398 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ASPHD2Q6ICH7 369 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KLC3Q6P597 504 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 LEG1Q6P5S2 330 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 LRIG3Q6UXM1 1119 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CASP12Q6UXS9 341 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SPATA21Q7Z572 469 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 MYPOPQ86VE0 399 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 CTAGE3PQ8IX95 158 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SIGLECL1Q8N7X8 197 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 POMGNT2Q8NAT1 580 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 DEFB108BQ8NET1 73 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 OR1K1Q8NGR3 316 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 FAM76AQ8TAV0 307 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CKAP2Q8WWK9 683 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ST8SIA1Q92185 356 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TAF15Q92804 592 aaKnown RBP eCLIP3.12□□□□□ -1.915e-6■□□□□ 8.5
RBM39-220ENST00000455343 BCL2L2Q92843 193 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 YIPF5Q969M3 257 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TMIGD2Q96BF3 282 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 COQ8BQ96D53 544 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 C16orf58Q96GQ5 468 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 EGLN2Q96KS0 407 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZNF385AQ96PM9 386 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 DUX5Q96PT3 197 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 KCNS3Q9BQ31 491 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CCDC106Q9BWC9 280 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 EBPLQ9BY08 206 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 LAT2Q9GZY6 243 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TPK1Q9H3S4 243 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 PIGUQ9H490 435 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 NARFLQ9H6Q4 476 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZNF665Q9H7R5 613 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 MOV10Q9HCE1 1003 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 EQTNQ9NQ60 294 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SERINC1Q9NRX5 453 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZNF275Q9NSD4 429 aaPredicted RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 ACER3Q9NUN7 267 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TMEM45AQ9NWC5 275 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 GRHL1Q9NZI5 618 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TMEM181Q9P2C4 612 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
RBM39-220ENST00000455343 UPB1Q9UBR1 384 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 ZDHHC2Q9UIJ5 367 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms