RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 CENPBD1B2RD01 187 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 BHLHE40O14503 412 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 DVL2O14641 736 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 IDH3BO43837 385 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 CNOT4O95628 575 aaKnown RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 TXNDC12O95881 172 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 CGAP01215 116 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 AGAP20933 346 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 PEX2P28328 305 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 CHRNB4P30926 498 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 OR3A2P47893 321 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 RPS6KA3P51812 740 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 SMSP52788 366 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 CLDN17P56750 224 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 VWA1Q6PCB0 445 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 AAED1Q7RTV5 226 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 NUFIP2Q7Z417 695 aaKnown RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 LNX2Q8N448 690 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 CNEP1R1Q8N9A8 125 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 OR2T33Q8NG76 320 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 OR8D4Q8NGM9 314 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 TEX47Q8TBZ9 253 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 ASB10Q8WXI3 467 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 SLC25A44Q96H78 314 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 RDH12Q96NR8 316 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 TSPAN32Q96QS1 320 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 SLC29A1Q99808 456 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 GABARAPL3Q9BY60 117 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 POLDIP3Q9BY77 421 aaKnown RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 PIGMQ9H3S5 423 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 MED29Q9NX70 200 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 IL20RAQ9UHF4 553 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 RNF6Q9Y252 685 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 ORC6Q9Y5N6 252 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 MYO7BQ6PIF6 2116 aa10.26□□□□□ -0.77
SCN9A-204ENST00000452182 INTS1Q8N201 2190 aaKnown RBP10.26□□□□□ -0.77
SCN9A-204ENST00000452182 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 A6NIZ1 184 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 H3BN98 237 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 J3QKU1 62 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SERPINI2O75830 405 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SOX14O95416 240 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CDH2P19022 906 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SDHAP31040 664 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 GIPRP48546 466 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CRISP1P54107 249 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 RAD23AP54725 363 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 RAP1BP61224 184 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 RAP1AP62834 184 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CDK5Q00535 292 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 LPCAT4Q643R3 524 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 BTLAQ7Z6A9 289 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 IGFN1Q86VF2 1251 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 TMEM123Q8N131 208 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ARIH2OSQ8N7S6 290 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF519Q8TB69 540 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 TXNDC15Q96J42 360 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 LRR1Q96L50 414 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 OR2M2Q96R28 347 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 IFT27Q9BW83 186 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 TSSK6Q9BXA6 273 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 MRPL13Q9BYD1 178 aaKnown RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 LINC00470Q9BZP3 86 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 TBC1D23Q9NUY8 699 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 JKAMPQ9P055 326 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 GRHPRQ9UBQ7 328 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF346Q9UL40 294 aaKnown RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ADAM18Q9Y3Q7 739 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ZNF726A6NNF4 738 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 MSTNO14793 375 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 AHCYL1O43865 530 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 MITFO75030 526 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 PPP1R3DO95685 299 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 IGFBP1P08833 259 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SELENOPP49908 381 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 BIDP55957 195 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ERVK-25P63136 954 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SIRPAP78324 504 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 NPRL3Q12980 569 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 LINC01559Q495D7 138 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CLEC12AQ5QGZ9 265 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SLC27A4Q6P1M0 643 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 NIPAL3Q6P499 406 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 XKRXQ6PP77 449 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CASP12Q6UXS9 341 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 TFAP2EQ6VUC0 442 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 MRGPRGQ86SM5 289 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 ADCK1Q86TW2 530 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 CCDC71Q8IV32 467 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-204ENST00000452182 POMGNT2Q8NAT1 580 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 LILRB4Q8NHJ6 448 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 Q96M85 177 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 EMC6Q9BV81 110 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 SLC25A19Q9HC21 320 aa10.25□□□□□ -0.77
SCN9A-204ENST00000452182 MALT1Q9UDY8 824 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms