RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ADAD1Q96M93 576 aaKnown RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF385AQ96PM9 386 aaKnown RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 TP63Q9H3D4 680 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF226Q9NYT6 803 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 A6NIZ1 184 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 M0R129 80 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 PRKYO43930 277 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 SLC2A10O95528 541 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 IFNGP01579 166 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 GABRB1P18505 474 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 ACVR1BP36896 505 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 BIDP55957 195 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 CLDN17P56750 224 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RAP1BP61224 184 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RAP1AP62834 184 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RPTNQ6XPR3 784 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 HDDC2Q7Z4H3 204 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 P4HA3Q7Z4N8 544 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 ADCK1Q86TW2 530 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 OR6X1Q8NH79 312 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 SNX18Q96RF0 628 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 GLRX2Q9NS18 164 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 EMC3Q9P0I2 261 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 DNAJC13O75165 2243 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 MBD3L4A6NDZ8 208 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 MBD3L3A6NE82 208 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 MBD3L5A6NJ08 208 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RIIAD1A6NNX1 92 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 GPR171O14626 319 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 SLC37A3Q8NCC5 494 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 OR52E2Q8NGJ4 325 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 OR8J1Q8NGP2 316 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 OR4K13Q8NH42 304 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 MBD3L2Q8NHZ7 208 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 TMEM163Q8TC26 289 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 UBE2FQ969M7 185 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 GMPPAQ96IJ6 420 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-203ENST00000449049 DDOQ99489 341 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 FN3KQ9H479 309 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 RCE1Q9Y256 329 aa12.49□□□□□ -0.41
SHMT2-203ENST00000449049 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 AKAP8O43823 692 aaKnown RBP12.48□□□□□ -0.41
SHMT2-203ENST00000449049 MPZL2O60487 215 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF432O94892 652 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 YES1P07947 543 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF3P17036 446 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
SHMT2-203ENST00000449049 SNRPGP62308 76 aaKnown RBP12.48□□□□□ -0.41
SHMT2-203ENST00000449049 IL5RAQ01344 420 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 RUNX1T1Q06455 604 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 CRMP1Q14194 572 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 MAD2L1BPQ15013 274 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-203ENST00000449049 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 SEM1Q6ZVN7 128 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 THAP5Q7Z6K1 395 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 MCEMP1Q8IX19 187 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 TUSC5Q8IXB3 177 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 C9orf106Q8NAJ2 232 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 RHOXF1Q8NHV9 184 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 HDAC2Q92769 488 aaKnown RBP12.48□□□□□ -0.41
SHMT2-203ENST00000449049 PLEKHA8Q96JA3 519 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 EMC6Q9BV81 110 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 GPR52Q9Y2T5 361 aa12.48□□□□□ -0.41
SHMT2-203ENST00000449049 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 XKRYO14609 159 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 ARHGEF9O43307 516 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 TLX2O43763 284 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 TRMUO75648 421 aaKnown RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 NTF4P34130 210 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 MARVELD2Q8N4S9 558 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-203ENST00000449049 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 NMNAT3Q96T66 252 aa12.47□□□□□ -0.41
SHMT2-203ENST00000449049 MRPL13Q9BYD1 178 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms