RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PHF21BQ96EK2 531 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 CNRIP1Q96F85 164 aaPredicted RBP5.67□□□□□ -1.5
SSXP3-201ENST00000442971 PKNOX2Q96KN3 472 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 SAMD8Q96LT4 415 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 QRSL1Q9H0R6 528 aaKnown RBP5.67□□□□□ -1.5
SSXP3-201ENST00000442971 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 PSME2Q9UL46 239 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 PPP1R3CQ9UQK1 317 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 ZNF780BQ9Y6R6 833 aa5.67□□□□□ -1.5
SSXP3-201ENST00000442971 CCL24O00175 119 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 PLOD3O60568 738 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 SCAF4O95104 1147 aaKnown RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 KCNH1O95259 989 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 TNFRSF1AP19438 455 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 NTSP30990 170 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 NPY4RP50391 375 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 SUMO3P55854 103 aaPredicted RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 OR2B6P58173 313 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 IRF8Q02556 426 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 RBBP4Q09028 425 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 CHIT1Q13231 466 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 ZNF404Q494X3 552 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 CDONQ4KMG0 1287 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 Q5VSD8 79 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 E4F1Q66K89 784 aaPredicted RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 OR2W3Q7Z3T1 314 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 VRK2Q86Y07 508 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 DENND6AQ8IWF6 608 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 FAM71DQ8N9W8 422 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 SLC26A10Q8NG04 563 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 OR9A2Q8NGT5 310 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 HUS1BQ8NHY5 278 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 VANGL1Q8TAA9 524 aaPredicted RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 STK35Q8TDR2 534 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 RAX2Q96IS3 184 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 ATF6BQ99941 703 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 LMF2Q9BU23 707 aaKnown RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 SEBOXQ9HB31 216 aaPredicted RBP5.66□□□□□ -1.5
SSXP3-201ENST00000442971 CYSLTR2Q9NS75 346 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 TAS2R13Q9NYV9 303 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 CARD8Q9Y2G2 431 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 KPTNQ9Y664 436 aa5.66□□□□□ -1.5
SSXP3-201ENST00000442971 A0A1W2PQD3 144 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 GXYLT2A0PJZ3 443 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 RPL36A-HNRNPH2H7BZ11 118 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 ETV2O00321 342 aaPredicted RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 TAPBPO15533 448 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 COQ9O75208 318 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 GLRA3O75311 464 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 SLC43A1O75387 559 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 IGLV1-40P01703 118 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 IGF1P05019 195 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PTMAP06454 111 aaKnown RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 IMPDH2P12268 514 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 ETS1P14921 441 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 ETS2P15036 469 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PRPH2P23942 346 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PTX3P26022 381 aaPredicted RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 TACR3P29371 465 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 LIPAP38571 399 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 GIPRP48546 466 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 CDH13P55290 713 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 CDKL1Q00532 357 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 ACSM1Q08AH1 577 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 GALNT1Q10472 559 aaPredicted RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 KLRD1Q13241 179 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PMS2P3Q13401 168 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 QPRTQ15274 297 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 TBCCQ15814 346 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 RNF130Q86XS8 419 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 ARMC8Q8IUR7 673 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 Q8N1Y9 231 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 AGGF1Q8N302 714 aaeCLIP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 KLHL30-AS1Q8NEE0 82 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 OR9K2Q8NGE7 335 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PHOSPHO1Q8TCT1 267 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 SLC25A43Q8WUT9 341 aaPredicted RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 LYZL4Q96KX0 146 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 SERPINB12Q96P63 405 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 MTERF1Q99551 399 aaKnown RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 NAA11Q9BSU3 229 aaPredicted RBP5.65□□□□□ -1.51
SSXP3-201ENST00000442971 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 LINC00470Q9BZP3 86 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 SLC19A3Q9BZV2 496 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 IKZF5Q9H5V7 419 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 C3orf14Q9HBI5 128 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 PFDN4Q9NQP4 134 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 GRHL1Q9NZI5 618 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 DNAJB11Q9UBS4 358 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 TBK1Q9UHD2 729 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 HDGFL3Q9Y3E1 203 aa5.65□□□□□ -1.51
SSXP3-201ENST00000442971 LRP2P98164 4655 aa5.64□□□□□ -1.51
SSXP3-201ENST00000442971 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
SSXP3-201ENST00000442971 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
SSXP3-201ENST00000442971 GOLGA6L6A8MZA4 724 aa5.64□□□□□ -1.51
SSXP3-201ENST00000442971 AKR1B15C9JRZ8 316 aaPredicted RBP5.64□□□□□ -1.51
SSXP3-201ENST00000442971 MANBAO00462 879 aa5.64□□□□□ -1.51
SSXP3-201ENST00000442971 EIF1BO60739 113 aaKnown RBP5.64□□□□□ -1.51
SSXP3-201ENST00000442971 ZNF189O75820 626 aaPredicted RBP5.64□□□□□ -1.51
SSXP3-201ENST00000442971 HAUS5O94927 633 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms