RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MS4A12Q9NXJ0 267 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GIN1Q9NXP7 522 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 KLHL28Q9NXS3 571 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPR83Q9NYM4 423 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CNOT2Q9NZN8 540 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 CALML5Q9NZT1 146 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF624Q9P2J8 865 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANKMY1Q9P2S6 941 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLEKHB1Q9UF11 243 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 NDRG3Q9UGV2 375 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 PHF11Q9UIL8 331 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC9A8Q9Y2E8 581 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 KLHL20Q9Y2M5 609 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 RPL36Q9Y3U8 105 aaKnown RBP3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 LIPGQ9Y5X9 500 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 POMT1Q9Y6A1 747 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 DSPPQ9NZW4 1301 aa3.11□□□□□ -1.91
HMGB3P11-201ENST00000440127 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0U1RQK1 487 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 IRGMA1A4Y4 181 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF320A2RRD8 509 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 GSAPA4D1B5 854 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR6C74A6NCV1 312 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 METTL15A6NJ78 407 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR5K4A6NMS3 321 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNTNA6NMZ2 147 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C2orf74A8MZ97 194 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KDM4EB2RXH2 506 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KPNA4O00629 521 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 HSPB6O14558 160 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENTPD6O75354 484 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRKRAO75569 313 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 EML2O95834 649 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 EPPINO95925 133 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ALPPP05187 535 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNRNP70P08621 437 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 IGFBP1P08833 259 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC35G6P0C7Q6 338 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OCM2P0CE71 109 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OCMP0CE72 109 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADORA3P0DMS8 318 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SMIM10L1P0DMW3 83 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ALPPL2P10696 532 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 PIPP12273 146 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 UGT2B7P16662 529 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 POLR2CP19387 275 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TNNI3P19429 210 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAGP20916 626 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF10P21506 573 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 GADD45AP24522 165 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ALDH4A1P30038 563 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 DCTDP32321 178 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CSTF2P33240 577 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OPRL1P41146 370 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RANBP1P43487 201 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RABIFP47224 123 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RGS6P49758 472 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TPMTP51580 245 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MLLT10P55197 1068 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TAS2R41P59536 307 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADORA2A-AS1P86434 159 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TNFRSF17Q02223 184 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RELAQ04206 551 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C17orf67Q0P5P2 114 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ST3GAL3Q11203 375 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ILF3Q12906 894 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 DGCR6Q14129 220 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF273Q14593 569 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 GINS1Q14691 196 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 LASP1Q14847 261 aaKnown RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRAM2Q15035 370 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SYT16Q17RD7 645 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RGS21Q2M5E4 152 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 KRTAP27-1Q3LI81 207 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TIMM50Q3ZCQ8 353 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANKDD1AQ495B1 522 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF672Q499Z4 452 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC25A30Q5SVS4 291 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TPRG1LQ5T0D9 272 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ATAD3BQ5T9A4 648 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C12orf73Q69YU5 71 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 MFSD12Q6NUT3 480 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C1orf94Q6P1W5 598 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 PODNL1Q6PEZ8 512 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 FIGLAQ6QHK4 219 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM107Q6UX40 140 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 PQLC2Q6ZP29 291 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 Q6ZSR6 202 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 USP43Q70EL4 1123 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ABHD13Q7L211 337 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 LINGO2Q7L985 606 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 OLIG3Q7RTU3 272 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 C16orf62Q7Z3J2 963 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 VN1R4Q7Z5H5 301 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZER1Q7Z7L7 766 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 IQCHQ86VS3 1027 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 CENPSQ8N2Z9 138 aa3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 LRRC25Q8N386 305 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P11-201ENST00000440127 TCEANCQ8N8B7 351 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms