RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 PARS2Q7L3T8 475 aaKnown RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 RD3Q7Z3Z2 195 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 C14orf144Q96I85 54 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 OR5V1Q9UGF6 321 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 OR52A4PA6NMU1 304 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 TMEM127O75204 238 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 ASGR2P07307 311 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 CNR1P21554 472 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 BDKRB2P30411 391 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 HOXA6P31267 233 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 MAT1AQ00266 395 aaKnown RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 ZNF805Q5CZA5 627 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 DMKNQ6E0U4 476 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 WDR88Q6ZMY6 472 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 OR2W3Q7Z3T1 314 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 SPICQ8N5J4 248 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 SOCS4Q8WXH5 440 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 FGF11Q92914 225 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 CPNE4Q96A23 557 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 PNPLA2Q96AD5 504 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 SMIM19Q96E16 107 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 LGR4Q9BXB1 951 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 CPEB1Q9BZB8 566 aaKnown RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-209ENST00000439886 HS3ST2Q9Y278 367 aa10.73□□□□□ -0.69
SMPD4-209ENST00000439886 HEATR5BQ9P2D3 2071 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 SPAG17Q6Q759 2223 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 PQBP1O60828 265 aaKnown RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 SLC25A12O75746 678 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 CTSLP07711 333 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 HIST1H1CP16403 213 aaKnown RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 ACTC1P68032 377 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 ACTA1P68133 377 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 BDH1Q02338 343 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 GLT8D1Q68CQ7 371 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 FAM111BQ6SJ93 734 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 LCTLQ6UWM7 567 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 TMEM150AQ86TG1 271 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 SLC25A38Q96DW6 304 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 BCL2L10Q9HD36 194 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 LHX9Q9NQ69 397 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 CMC2Q9NRP2 79 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 HCFC1R1Q9NWW0 138 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 PPP4R1LQ9P1A2 415 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 KCNK7Q9Y2U2 307 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 TMEM72A0PK05 275 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 TBX6O95947 436 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 HPP00738 406 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 RPLP2P05387 115 aaKnown RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 HTR2AP28223 471 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 CD34P28906 385 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 WASP42768 502 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 ACTR1AP61163 376 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 GAS6Q14393 721 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 DPPA4Q7L190 304 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 UBE3DQ7Z6J8 389 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 LDLRAD3Q86YD5 345 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 CHST4Q8NCG5 386 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 OR2L5Q8NG80 312 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 OR5T3Q8NGG3 340 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 MTHFD2LQ9H903 347 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 TREM2Q9NZC2 230 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 PCYT1BQ9Y5K3 369 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-209ENST00000439886 ATG2BQ96BY7 2078 aa10.72□□□□□ -0.69
SMPD4-209ENST00000439886 CXorf65A6NEN9 183 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 OR5H14A6NHG9 310 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 WASH3PC4AMC7 463 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 H7C1C5 153 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 ZNF28P17035 718 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 HIST1H1TP22492 207 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-209ENST00000439886 CSF2RBP32927 897 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 PRKXP51817 358 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 RAB4BP61018 213 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 LCN6P62502 163 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 PRKCZQ05513 592 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 UBXN2BQ14CS0 331 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 DUSP5Q16690 384 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 DEFB134Q4QY38 66 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 KRBOX4Q5JUW0 171 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 ARHGAP40Q5TG30 622 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 WBP1Q96G27 269 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 BSCL2Q96G97 398 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-209ENST00000439886 ZNF350Q9GZX5 532 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 PLEKHM1Q9Y4G2 1056 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 NPTNQ9Y639 398 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 ANKRD20A5PA0PJZ0 165 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 DUXAA6NLW8 204 aa10.71□□□□□ -0.69
SMPD4-209ENST00000439886 LILRB5O75023 590 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms