RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SPATA21Q7Z572 469 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 PXKQ7Z7A4 578 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
AC004540.1-201ENST00000439120 OR5J2Q8NH18 312 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 TSPEARQ8WU66 669 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 TXNDC15Q96J42 360 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 BEX2Q9BXY8 128 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 PLK3Q9H4B4 646 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 DYNLRB1Q9NP97 96 aa16■□□□□ 0.15
AC004540.1-201ENST00000439120 PLPP3O14495 311 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 EDF1O60869 148 aaKnown RBP15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 HLA-HP01893 362 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 IGHV4-31P0DP07 118 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 PCGF2P35227 344 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 NR4A2P43354 598 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 CSNK1A1P48729 337 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 HGFACQ04756 655 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 SNTB2Q13425 540 aaKnown RBP15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 KRT80Q6KB66 452 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 SVOPLQ8N434 492 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF540Q8NDQ6 660 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 OR6T1Q8NGN1 323 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF385DQ9H6B1 395 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 KAT8Q9H7Z6 458 aaKnown RBP15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 VIPAS39Q9H9C1 493 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 LPAR3Q9UBY5 353 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 SPEF1Q9Y4P9 236 aa15.99■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF503-AS2A6NEH8 195 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 HIST1H2ABP04908 130 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 APEHP13798 732 aaKnown RBP15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 B4GALT1P15291 398 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 CD247P20963 164 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 BIDP55957 195 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 PIGFQ07326 219 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 HIST3H2AQ7L7L0 130 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 GPR32P1Q8NGA4 272 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 OR10A6Q8NH74 314 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 ADAMTS16Q8TE57 1224 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 RASSF5Q8WWW0 418 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 HIST1H2ACQ93077 130 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 FOXN4Q96NZ1 517 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 FOXB1Q99853 325 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 SHARPINQ9H0F6 387 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 NOX3Q9HBY0 568 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 NANSQ9NR45 359 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 SLC7A7Q9UM01 511 aa15.98■□□□□ 0.15
AC004540.1-201ENST00000439120 SH3PXD2BA1X283 911 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 TRAPPC13A5PLN9 417 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 RNF212BA8MTL3 300 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 VWC2LB2RUY7 222 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 KPNA4O00629 521 aaPredicted RBP15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 RNF13O43567 381 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 ENTPD5O75356 428 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 RAB36O95755 333 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 CH25HO95992 272 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 FAM157CP0CG43 387 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 UMPSP11172 480 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 IFNGR1P15260 489 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 PTDSS1P48651 473 aaKnown RBP15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 CYLC2Q14093 348 aaPredicted RBP15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 NPTX1Q15818 432 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 TRMT5Q32P41 509 aaKnown RBP15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 METTL21CQ5VZV1 264 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 FAM166AQ6J272 317 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 SPATA3Q8NHX4 192 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 SH3GL1Q99961 368 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 TMEM160Q9NX00 188 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 KCNS2Q9ULS6 477 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 CMAHPQ9Y471 501 aa15.97■□□□□ 0.15
AC004540.1-201ENST00000439120 YLPM1P49750 1951 aaKnown RBP15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 LMX1BO60663 402 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 UBL3O95164 117 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 DAOP14920 347 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 LSP1P33241 339 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 GALK2Q01415 458 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF74Q16587 644 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 VMACQ2NL98 169 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 MMEL1Q495T6 779 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 GKAP1Q5VSY0 366 aaPredicted RBP15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 LINC00114Q6XXX2 140 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 SLC35D2Q76EJ3 337 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 ZNF627Q7L945 461 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 RBM45Q8IUH3 476 aaKnown RBP15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 NEU4Q8WWR8 484 aaPredicted RBP15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 TAMM41Q96BW9 452 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 MS4A3Q96HJ5 214 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 MPP4Q96JB8 637 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 DENND2DQ9H6A0 471 aaPredicted RBP15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 CHODLQ9H9P2 273 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 MRGBPQ9NV56 204 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 B3GNT2Q9NY97 397 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 FBXL3Q9UKT7 428 aa15.96■□□□□ 0.15
AC004540.1-201ENST00000439120 LOC100289279A0A1B0GTE1 492 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 TROVE2P10155 538 aaKnown RBP eCLIP15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 NR4A1P22736 598 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 RAB1AP62820 205 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 WDR88Q6ZMY6 472 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 NANOGNBQ7Z5D8 188 aa15.95■□□□□ 0.14
AC004540.1-201ENST00000439120 OR6X1Q8NH79 312 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms