RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 HLA-DOBP13765 273 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
MSH5-208ENST00000429846 PCMT1P22061 227 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 CBLP22681 906 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
MSH5-208ENST00000429846 PMS2P3Q13401 168 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 TRMT5Q32P41 509 aaKnown RBP12.85□□□□□ -0.35
MSH5-208ENST00000429846 GLIPR1L2Q4G1C9 344 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 PHYHD1Q5SRE7 291 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 REP15Q6BDI9 236 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 ARMC8Q8IUR7 673 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 HIPK4Q8NE63 616 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 FOXB1Q99853 325 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 CCDC28BQ9BUN5 200 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 EMC6Q9BV81 110 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 MS4A5Q9H3V2 200 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 MED29Q9NX70 200 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 POFUT2Q9Y2G5 429 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
MSH5-208ENST00000429846 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ZNF726A6NNF4 738 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 UBL3O95164 117 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 RAB36O95755 333 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ADRA2AP08913 450 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ZNF35P13682 527 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 IFNGR1P15260 489 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 B4GALT1P15291 398 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 GLRXP35754 106 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ATP4BP51164 291 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 CDH15P55291 814 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 PAGE3Q5JUK9 113 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ZCCHC24Q8N2G6 241 aaKnown RBP12.84□□□□□ -0.35
MSH5-208ENST00000429846 C10orf111Q8N326 155 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 OR6N1Q8NGY5 312 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 OR5J2Q8NH18 312 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 C1orf159Q96HA4 380 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 ZNF75AQ96N20 296 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 MRPL37Q9BZE1 423 aaKnown RBP12.84□□□□□ -0.35
MSH5-208ENST00000429846 SLC52A3Q9NQ40 469 aa12.84□□□□□ -0.35
MSH5-208ENST00000429846 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.84□□□□□ -0.35
MSH5-208ENST00000429846 PLPP3O14495 311 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 CHP2O43745 196 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 IGFBP1P08833 259 aaPredicted RBP12.83□□□□□ -0.36
MSH5-208ENST00000429846 LSP1P33241 339 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 PTDSS1P48651 473 aaKnown RBP12.83□□□□□ -0.36
MSH5-208ENST00000429846 CSNK1A1P48729 337 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 IDH3AP50213 366 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 CDH12P55289 794 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 GALK2Q01415 458 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 NHLRC1Q6VVB1 395 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
MSH5-208ENST00000429846 C10orf53Q8N6V4 93 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 TPK1Q9H3S4 243 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 IKZF5Q9H5V7 419 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.36
MSH5-208ENST00000429846 TMEFF2Q9UIK5 374 aaPredicted RBP12.83□□□□□ -0.36
MSH5-208ENST00000429846 TCF21O43680 179 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 TPST2O60704 377 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 MFN2O95140 757 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 VIMP08670 466 aaKnown RBP12.82□□□□□ -0.36
MSH5-208ENST00000429846 ADORA3P0DMS8 318 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 AHCYP23526 432 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 AQP1P29972 269 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 IL2RGP31785 369 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 GIPRP48546 466 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
MSH5-208ENST00000429846 PCBP3P57721 371 aaKnown RBP12.82□□□□□ -0.36
MSH5-208ENST00000429846 RAB1AP62820 205 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 PIGFQ07326 219 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 RBBP4Q09028 425 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 FXNQ16595 210 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
MSH5-208ENST00000429846 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 OR6X1Q8NH79 312 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 TXNDC15Q96J42 360 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 MCHR1Q99705 422 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 CPPED1Q9BRF8 314 aaPredicted RBP12.82□□□□□ -0.36
MSH5-208ENST00000429846 REV1Q9UBZ9 1251 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 SLC7A8Q9UHI5 535 aa12.82□□□□□ -0.36
MSH5-208ENST00000429846 B4DSR2 109 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 OR6A2O95222 327 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 ACHEP22303 614 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 AQP5P55064 265 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 BIDP55957 195 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
MSH5-208ENST00000429846 TRIP10Q15642 601 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms