RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TMEM43Q9BTV4 400 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 INTS9Q9NV88 658 aaKnown RBP14.78□□□□□ -0.04
TRIM39-209ENST00000428728 LPAR3Q9UBY5 353 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 KCNS2Q9ULS6 477 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 POFUT2Q9Y2G5 429 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 NOX1Q9Y5S8 564 aa14.78□□□□□ -0.04
TRIM39-209ENST00000428728 CPSF4LA6NMK7 179 aaKnown RBP14.77□□□□□ -0.05
TRIM39-209ENST00000428728 ANGPT2O15123 496 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 ERCC1P07992 297 aaPredicted RBP14.77□□□□□ -0.05
TRIM39-209ENST00000428728 PCBP3P57721 371 aaKnown RBP14.77□□□□□ -0.05
TRIM39-209ENST00000428728 PIGFQ07326 219 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 GSG1Q2KHT4 349 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
TRIM39-209ENST00000428728 RETREG3Q86VR2 466 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 CCDC36Q8IYA8 594 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 GPR32P1Q8NGA4 272 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 CKAP2Q8WWK9 683 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 TMEM158Q8WZ71 300 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 MSI2Q96DH6 328 aaKnown RBP14.77□□□□□ -0.05
TRIM39-209ENST00000428728 ANKRD27Q96NW4 1050 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 CGREF1Q99674 301 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 ARHGDIGQ99819 225 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 RABEP2Q9H5N1 569 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 EVA1AQ9H8M9 152 aa14.77□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF726A6NNF4 738 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 VSTM5A8MXK1 200 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 KPNA4O00629 521 aaPredicted RBP14.76□□□□□ -0.05
TRIM39-209ENST00000428728 PLPP3O14495 311 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 CHP2O43745 196 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 ADORA3P0DMS8 318 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 DAOP14920 347 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 CSNK1A1P48729 337 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 NPTX1Q15818 432 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 DUSP7Q16829 419 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF613Q6PF04 617 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 WDR88Q6ZMY6 472 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 OR6T1Q8NGN1 323 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 OR5J2Q8NH18 312 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 LRR1Q96L50 414 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 DOK1Q99704 481 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 TPK1Q9H3S4 243 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 NPHS2Q9NP85 383 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 B3GNT2Q9NY97 397 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 NDUFAF1Q9Y375 327 aa14.76□□□□□ -0.05
TRIM39-209ENST00000428728 MXRA5Q9NR99 2828 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 TMEM129A0AVI4 362 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 LRP5LA4QPB2 252 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 M0QX08 132 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 STAMBPO95630 424 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 MT-ATP6P00846 226 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 ADRA2AP08913 450 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 IFNGR1P15260 489 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF23P17027 643 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 SRD5A1P18405 259 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 PTDSS1P48651 473 aaKnown RBP14.75□□□□□ -0.05
TRIM39-209ENST00000428728 BIDP55957 195 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 RBBP4Q09028 425 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 NFYCQ13952 458 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 ENTPD8Q5MY95 495 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 PXKQ7Z7A4 578 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 RBM45Q8IUH3 476 aaKnown RBP14.75□□□□□ -0.05
TRIM39-209ENST00000428728 IL17RDQ8NFM7 739 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 OR4D11Q8NGI4 311 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 ADAMTS16Q8TE57 1224 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 NEU4Q8WWR8 484 aaPredicted RBP14.75□□□□□ -0.05
TRIM39-209ENST00000428728 FOXB1Q99853 325 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 SOX7Q9BT81 388 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF385DQ9H6B1 395 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 FBXO9Q9UK97 447 aaPredicted RBP14.75□□□□□ -0.05
TRIM39-209ENST00000428728 CMAHPQ9Y471 501 aa14.75□□□□□ -0.05
TRIM39-209ENST00000428728 FMO6PO60774 539 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 OR6A2O95222 327 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 RAB36O95755 333 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 CH25HO95992 272 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF14P17017 642 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-209ENST00000428728 NR4A1P22736 598 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 GIPRP48546 466 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 MELKQ14680 651 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 MSMPQ1L6U9 139 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 TRMT5Q32P41 509 aaKnown RBP14.74□□□□□ -0.05
TRIM39-209ENST00000428728 FAM120AOSQ5T036 256 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 NHLRC1Q6VVB1 395 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 SNX32Q86XE0 403 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 DPP10Q8N608 796 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF540Q8NDQ6 660 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 MAGEB18Q96M61 343 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 MRPL37Q9BZE1 423 aaKnown RBP14.74□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF224Q9NZL3 707 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 SLC7A7Q9UM01 511 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 TRIM33Q9UPN9 1127 aa14.74□□□□□ -0.05
TRIM39-209ENST00000428728 HMGB1P1B2RPK0 211 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 LYNX1G3V0Z9 82 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 RNF13O43567 381 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 TGFAP01135 160 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 THY1P04216 161 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 IGFBP1P08833 259 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 LYNX1P0DP58 116 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 HNF1AP20823 631 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 CD247P20963 164 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 PCGF2P35227 344 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms