RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RPL22L1Q6P5R6 122 aaKnown RBP9.38□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF517Q6ZMY9 492 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-210ENST00000428307 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 THEM6Q8WUY1 208 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 ORAI1Q96D31 301 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 IMMP1LQ96LU5 166 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 OR14A2Q96R54 314 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 TXNIPQ9H3M7 391 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 IKZF2Q9UKS7 526 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 LOXL2Q9Y4K0 774 aa9.38□□□□□ -0.91
HDAC9-210ENST00000428307 FTCDNL1E5RQL4 147 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 FLRT2O43155 660 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SSX4O60224 188 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 GAAP10253 952 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SPNP16150 400 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CD53P19397 219 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MYL9P24844 172 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 C19orf57Q0VDD7 668 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SF3A2Q15428 464 aaKnown RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 TRAM1Q15629 374 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 TAB1Q15750 504 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 PYDC2Q56P42 97 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 LIPNQ5VXI9 398 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CNIH2Q6PI25 160 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 GDPD3Q7L5L3 318 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 DTX3Q8N9I9 347 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF248Q8NDW4 579 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 OR11G2Q8NGC1 345 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CCDC32Q9BV29 185 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SRRQ9GZT4 340 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF160Q9HCG1 818 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 AKAP7Q9P0M2 348 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 COL5A1P20908 1838 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SDK2Q58EX2 2172 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MED12Q93074 2177 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 KNTC1P50748 2209 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 AHCTF1Q8WYP5 2266 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 NSG1A0A0A6YYJ2 146 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 A0A1B0GTH9 108 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MS4A18H0YCH9 400 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZFPL1O95159 310 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SLC2A2P11168 524 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CTLA4P16410 223 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 APEX1P27695 318 aaKnown RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 FOLR3P41439 243 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CAPZA2P47755 286 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 RPS11P62280 158 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 INSM1Q01101 510 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 PUDPQ08623 228 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MS4A18Q3C1V0 323 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF528Q3MIS6 628 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF684Q5T5D7 378 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 SLC35D2Q76EJ3 337 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 RAB11FIP2Q7L804 512 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 YIPF7Q8N8F6 280 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 WDSUB1Q8N9V3 476 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF519Q8TB69 540 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 DDIT4LQ96D03 193 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MRPL48Q96GC5 212 aaKnown RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 INTS14Q96SY0 518 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CDCP1Q9H5V8 836 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MRPL39Q9NYK5 338 aaKnown RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 PISDQ9UG56 409 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 MRM2Q9UI43 246 aaKnown RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 PADI1Q9ULC6 663 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 RASD1Q9Y272 281 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 TRAPPC4Q9Y296 219 aa9.37□□□□□ -0.91
HDAC9-210ENST00000428307 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-210ENST00000428307 A0A1B0GVC2 190 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 A6NIN4 97 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 G3V3Y1 287 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 H3BSH0 61 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF593O00488 134 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 DKK1O94907 266 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 PAHP00439 452 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 IMPDH2P12268 514 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 IL7P13232 177 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 IFNGR1P15260 489 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TCN2P20062 427 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ALOX5APP20292 161 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 DEFA1P59665 94 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 DEFA3P59666 94 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 PPP3R1P63098 170 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 HSF2Q03933 536 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TLE3Q04726 772 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CARTPTQ16568 116 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 MEP1BQ16820 701 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 PLPPR5Q32ZL2 321 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SLC25A35Q3KQZ1 300 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CCDC58Q4VC31 144 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 LRRC69Q6ZNQ3 347 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 H1FNTQ75WM6 255 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SPATC1Q76KD6 591 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms