RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 FCN2Q15485 313 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF528Q3MIS6 628 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 OLFML2AQ68BL7 652 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 LRRN1Q6UXK5 716 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 IDO2Q6ZQW0 420 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 GCNT2Q8N0V5 402 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 MORN4Q8NDC4 146 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 FOXN4Q96NZ1 517 aa9.76□□□□□ -0.85
TCOF1-204ENST00000427724 MYO7BQ6PIF6 2116 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 C21orf140B9A014 251 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 TOX3O15405 576 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 GREM1O60565 184 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 TNFSF4P23510 183 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 EIF1P41567 113 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 POU3F4P49335 361 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 RNF4P78317 190 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 MLLT11Q13015 90 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 CAMK2DQ13557 499 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 GLCCI1Q86VQ1 547 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 KDM8Q8N371 416 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 LINC01555Q8NAE3 123 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 C16orf52Q8NHV5 167 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 WDR20Q8TBZ3 569 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 AMDHD1Q96NU7 426 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 MGAT4CQ9UBM8 478 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PCOLCE2Q9UKZ9 415 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 CCL27Q9Y4X3 112 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ARID1AO14497 2285 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 K7ESF4 209 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 RGS13O14921 159 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PAPLNO95428 1278 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SCG5P05408 212 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ELAVL4P26378 380 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 TSFMP43897 325 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 GZMKP49863 264 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SNTB2Q13425 540 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ATXN7L3Q14CW9 347 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 LEG1Q6P5S2 330 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ABHD5Q8WTS1 349 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 GABARAPL3Q9BY60 117 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 NIPAL2Q9H841 368 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF223Q9UK11 482 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PROCRQ9UNN8 238 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 OR14I1A6ND48 311 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 DISC1C4P0D8 188 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 M0R082 166 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PAHP00439 452 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 CSRP1P21291 193 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 S100GP29377 79 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SLC26A5P58743 744 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 RPS25P62851 125 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 GLYR1Q49A26 553 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 WIPI1Q5MNZ9 446 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ELP2Q6IA86 826 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SPINK14Q6IE38 97 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SLC22A25Q6T423 547 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 SLC16A14Q7RTX9 510 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 MRPL21Q7Z2W9 205 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 NR4A3Q92570 626 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 ARSGQ96EG1 525 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 TSNAXQ99598 290 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 PIGUQ9H490 435 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 RBFOX1Q9NWB1 397 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 TXNL4BQ9NX01 149 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 DNAJB11Q9UBS4 358 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 OSGIN2Q9Y236 505 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 MRPS18BQ9Y676 258 aaKnown RBP9.75□□□□□ -0.85
TCOF1-204ENST00000427724 WDR81Q562E7 1941 aa9.75□□□□□ -0.85
TCOF1-204ENST00000427724 B4DXG7 233 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 SUSD5O60279 629 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 RP2O75695 350 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 GP1BAP07359 652 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 WNT3P56703 355 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 FAM71E1Q6IPT2 247 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 ULK3Q6PHR2 472 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 MISPQ8IVT2 679 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 BEST3Q8N1M1 668 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 SLC7A13Q8TCU3 470 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 APH1AQ96BI3 265 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 SPNS1Q9H2V7 528 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 B3GNT2Q9NY97 397 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 PCDHGB1Q9Y5G3 927 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 FKBP7Q9Y680 259 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 A3GALT2U3KPV4 340 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 PARP14Q460N5 1801 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 A0A1W2PNR3 127 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 PRKYO43930 277 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 SLC43A1O75387 559 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 ALDOBP05062 364 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 F13BP05160 661 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 ARFRP1Q13795 201 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 COL28A1Q2UY09 1125 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 ZNF782Q6ZMW2 699 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-204ENST00000427724 FJX1Q86VR8 437 aa9.74□□□□□ -0.85
TCOF1-204ENST00000427724 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms