RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
SNX3-204ENST00000426155 RPL18Q07020 188 aaKnown RBP11.9□□□□□ -0.5
SNX3-204ENST00000426155 PGGHGQ32M88 737 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 GLYATQ6IB77 296 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 KLHL17Q6TDP4 642 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 KLHL24Q6TFL4 600 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 FKBP9P1Q75LS8 142 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 SLC35D2Q76EJ3 337 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 MYPOPQ86VE0 399 aaPredicted RBP11.9□□□□□ -0.5
SNX3-204ENST00000426155 TGIF2LYQ8IUE0 185 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 OFCC1Q8IZS5 231 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 PGAM4Q8N0Y7 254 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 PIGTQ969N2 578 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 SGTBQ96EQ0 304 aa11.9□□□□□ -0.5
SNX3-204ENST00000426155 MAGED1Q9Y5V3 778 aaPredicted RBP11.9□□□□□ -0.5
SNX3-204ENST00000426155 IGHV1-18A0A0C4DH31 117 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 E7EQL1 145 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ATP6V1G2-DDX39BF2Z307 99 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 NDUFAB1O14561 156 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 FAM107AO95990 144 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 CELA3BP08861 270 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 THRBP10828 461 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 IFI30P13284 250 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 MAKP20794 623 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 CDKN1AP38936 164 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 AQP2P41181 271 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 PRPS1P60891 318 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 MXRA7P84157 204 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ZP4Q12836 540 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 Q5PR19 223 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 SLC22A25Q6T423 547 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ANKS4BQ8N8V4 417 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 OR6N1Q8NGY5 312 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 SMAP2Q8WU79 429 aaPredicted RBP11.89□□□□□ -0.51
SNX3-204ENST00000426155 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 HTRA1Q92743 480 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 PIP5K1AQ99755 562 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ULBP2Q9BZM5 246 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
SNX3-204ENST00000426155 POU2F3Q9UKI9 436 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 MED31Q9Y3C7 131 aa11.89□□□□□ -0.51
SNX3-204ENST00000426155 ZNF726A6NNF4 738 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 ZNF99A8MXY4 864 aaPredicted RBP11.88□□□□□ -0.51
SNX3-204ENST00000426155 hCG_2039718K7EN88 272 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 DIRAS1O95057 198 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 WNT11O96014 354 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 HIST1H2ABP04908 130 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 B4GALT1P15291 398 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 PTAFRP25105 342 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 CSNK1A1P48729 337 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 PTH2RP49190 550 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 UBE2NP61088 152 aaKnown RBP11.88□□□□□ -0.51
SNX3-204ENST00000426155 VLDLRP98155 873 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 RUNX1T1Q06455 604 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 GKAP1Q5VSY0 366 aaPredicted RBP11.88□□□□□ -0.51
SNX3-204ENST00000426155 TBPL2Q6SJ96 375 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 HIST3H2AQ7L7L0 130 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 IGFN1Q86VF2 1251 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 NRMQ8IXM6 262 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 DEFB107AQ8IZN7 70 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 HIST1H2ACQ93077 130 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
SNX3-204ENST00000426155 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 NOX3Q9HBY0 568 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
SNX3-204ENST00000426155 CD300AQ9UGN4 299 aa11.88□□□□□ -0.51
SNX3-204ENST00000426155 TRAV27A0A087WT01 109 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 A0A087WUU8 490 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 ARPC4-TTLL3A0A0A6YYG9 625 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 ARPC2O15144 300 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 HSD17B1P14061 328 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 GPR4P46093 362 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 CAPZA2P47755 286 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
SNX3-204ENST00000426155 RPS4XP62701 263 aaKnown RBP11.87□□□□□ -0.51
SNX3-204ENST00000426155 MYBPC1Q00872 1141 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 LAPTM4AQ15012 233 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 TRAM2Q15035 370 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 FXNQ16595 210 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 SSX8Q7RTT4 187 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
SNX3-204ENST00000426155 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 OR6X1Q8NH79 312 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 MAGEE2Q8TD90 523 aaPredicted RBP11.87□□□□□ -0.51
SNX3-204ENST00000426155 TMEM54Q969K7 222 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 BPIFA2Q96DR5 249 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 RADILQ96JH8 1075 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 HS6ST2Q96MM7 605 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 SLC38A2Q96QD8 506 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
SNX3-204ENST00000426155 MOKQ9UQ07 419 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms