RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HDHD5Q9BXW7 423 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 DGCR6LQ9BY27 220 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 PDP1Q9P0J1 537 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ICE1Q9Y2F5 2266 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ARRDC5A6NEK1 342 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ENTPD5O75356 428 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 LYZL6O75951 148 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 FCGR1AP12314 374 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 RPL4P36578 427 aaKnown RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 PEX19P40855 299 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 RUNX1T1Q06455 604 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 TAF11Q15544 211 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 PHYHD1Q5SRE7 291 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ANKRD34AQ69YU3 496 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 SMARCD3Q6STE5 483 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF433Q8N7K0 673 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 LINC01560Q8TB33 94 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 GTPBP3Q969Y2 492 aaKnown RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 SLC25A44Q96H78 314 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ALKBH3Q96Q83 286 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 FEVQ99581 238 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 KATNB1Q9BVA0 655 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 IL20RAQ9UHF4 553 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF346Q9UL40 294 aaKnown RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 MGAT4BQ9UQ53 548 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 SPTAN1Q13813 2472 aaKnown RBP21.56■■□□□ 1.04
VEGFA-209ENST00000425836 ERICH4A6NGS2 130 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 TUBAL3A6NHL2 446 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 H3BNX3 289 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 IGHMP01871 453 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 CD14P08571 375 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 ITGA5P08648 1049 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 MPGP29372 298 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 ERVK-25P63136 954 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 TOP3AQ13472 1001 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-209ENST00000425836 ZFP1Q6P2D0 407 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 AMIGO2Q86SJ2 522 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 C10orf67Q8IYJ2 551 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 GPR137CQ8N3F9 429 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 KISS1RQ969F8 398 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-209ENST00000425836 GPX7Q96SL4 187 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-209ENST00000425836 NDEL1Q9GZM8 345 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 OR52D1Q9H346 318 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 TAS2R16Q9NYV7 291 aa21.56■■□□□ 1.04
VEGFA-209ENST00000425836 HCFC1P51610 2035 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF587BE7ETH6 402 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 M0R3G1 203 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 KIR2DL3P43628 341 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 RPL27P61353 136 aaKnown RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 RFX4Q33E94 735 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 C9orf135Q5VTT2 229 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 HMBOX1Q6NT76 420 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 SHQ1Q6PI26 577 aaKnown RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF620Q6ZNG0 422 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 BHLHA15Q7RTS1 189 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ABHD12BQ7Z5M8 362 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 STEAP2Q8NFT2 490 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 OR6N1Q8NGY5 312 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 FANK1Q8TC84 345 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 TMEM54Q969K7 222 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF566Q969W8 418 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 NRBF2Q96F24 287 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 WFIKKN1Q96NZ8 548 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 TSPAN32Q96QS1 320 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 NIPSNAP1Q9BPW8 284 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 BDH2Q9BUT1 245 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 POLDIP3Q9BY77 421 aaKnown RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ACTR6Q9GZN1 396 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 ADAM18Q9Y3Q7 739 aa21.55■■□□□ 1.04
VEGFA-209ENST00000425836 MAGED1Q9Y5V3 778 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-209ENST00000425836 RPL36A-HNRNPH2H7BZ11 118 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 PGA4P0DJD7 388 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 PGA3P0DJD8 388 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 COX6B1P14854 86 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 PRKACGP22612 351 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 IL32P24001 234 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 CSNK1A1P48729 337 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 ROR2Q01974 943 aaKnown RBP21.54■■□□□ 1.04
VEGFA-209ENST00000425836 DPY19L2P2Q6ZN68 376 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 RASSF6Q6ZTQ3 369 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 C22orf34Q6ZV56 151 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 HDDC2Q7Z4H3 204 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 MRPL13Q9BYD1 178 aaKnown RBP21.54■■□□□ 1.04
VEGFA-209ENST00000425836 OR10A4Q9H209 315 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 GPR35Q9HC97 309 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 NRIP3Q9NQ35 241 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 CRIM1Q9NZV1 1036 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 NDRG3Q9UGV2 375 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 BAHCC1Q9P281 2608 aa21.54■■□□□ 1.04
VEGFA-209ENST00000425836 TRMUO75648 421 aaKnown RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 IGHG1P01857 330 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ACADSP16219 412 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ARHGDIAP52565 204 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 CD300LDQ6UXZ3 194 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 FAM122BQ7Z309 247 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 OR5K1Q8NHB7 308 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF519Q8TB69 540 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 S100PBPQ96BU1 408 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ZNF837Q96EG3 531 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 SAMD8Q96LT4 415 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms