RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DHFRP00374 187 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CHRNA1P02708 482 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 KRT8P05787 483 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 KLK3P07288 261 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TRAPPC2P0DI81 140 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TRAPPC2BP0DI82 140 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 NELFEP18615 380 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 F8A1P23610 371 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 HTR1FP30939 366 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ACTR1BP42025 376 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 OR1G1P47890 313 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 QARSP47897 775 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RAD23AP54725 363 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 EIF3EP60228 445 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TSPAN5P62079 268 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 YWHAEP62258 255 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ESRRGP62508 458 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 UBE2IP63279 158 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 BEX3Q00994 111 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 HSF2Q03933 536 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CDH17Q12864 832 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 BFSP1Q12934 665 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 GRB7Q14451 532 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 KCNJ11Q14654 390 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TSC22D1Q15714 1073 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PARP15Q460N3 678 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TEX30Q5JUR7 227 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RABGAP1LQ5R372 815 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 LDLRAP1Q5SW96 308 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 MARCH8Q5T0T0 291 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 MPP7Q5T2T1 576 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 HES5Q5TA89 166 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 LAMTOR1Q6IAA8 161 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PMF1Q6P1K2 205 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CCDC137Q6PK04 289 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CLEC2AQ6UVW9 174 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 Q6ZRG5 221 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CENPUQ71F23 418 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 KRT74Q7RTS7 529 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PIWIL3Q7Z3Z3 882 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 GALNT10Q86SR1 603 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 LINC00523Q86TU6 105 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PLCZ1Q86YW0 608 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 THNSL1Q8IYQ7 743 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SYCE1Q8N0S2 351 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TTC5Q8N0Z6 440 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SIX6OS1Q8N1H7 587 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZCCHC7Q8N3Z6 543 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SNX31Q8N9S9 440 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TMEM35BQ8NCS4 154 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TRPV3Q8NET8 790 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 OR52K1Q8NGK4 314 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 OR6Q1Q8NGQ2 317 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF461Q8TAF7 563 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 FBXO30Q8TB52 745 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZFAND1Q8TCF1 268 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 MYDGFQ969H8 173 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 BIRC7Q96CA5 298 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 BSCL2Q96G97 398 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PPP1R36Q96LQ0 422 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINB11Q96P15 392 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 OR52B2Q96RD2 323 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CNPY3Q9BT09 278 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TRIM62Q9BVG3 475 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 OSBPL11Q9BXB4 747 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RSPO3Q9BXY4 272 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ANKRD60Q9BZ19 345 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 C2orf40Q9H1Z8 148 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 SAV1Q9H4B6 383 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RANBP3Q9H6Z4 567 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 TRIM45Q9H8W5 580 aaPredicted RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZFP14Q9HCL3 533 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 MRPL17Q9NRX2 175 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 GLRX2Q9NS18 164 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RGS18Q9NS28 235 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 DNAJC11Q9NVH1 559 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 NECAP2Q9NVZ3 263 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 DUS2Q9NX74 493 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 FBXL12Q9NXK8 326 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CTSFQ9UBX1 484 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PCYOX1Q9UHG3 505 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 PSME2Q9UL46 239 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 DUSP12Q9UNI6 340 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 POMPQ9Y244 141 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 CCL27Q9Y4X3 112 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RIMS1Q86UR5 1692 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ZSWIM8A7E2V4 1837 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 YLPM1P49750 1951 aaKnown RBP2.49□□□□□ -2.01
LINC01040-201ENST00000425048 ERCC6L2Q5T890 1561 aa2.49□□□□□ -2.01
LINC01040-201ENST00000425048 RREB1Q92766 1687 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 A2ML1A8K2U0 1454 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 LRRK1Q38SD2 2015 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 A0A1B0GV90 55 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 OR6C74A6NCV1 312 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 I3L521 148 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 DNASE2O00115 360 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 UBE2CO00762 179 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 DLGAP1O14490 977 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZBTB5O15062 677 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms