RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SYT6Q5T7P8 510 aaPredicted RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 LIPKQ5VXJ0 399 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ARL9Q6T311 187 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TUBA1AQ71U36 451 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 LUZP2Q86TE4 346 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CISD2Q8N5K1 135 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 OR4F15Q8NGB8 312 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 OR4Q3Q8NH05 313 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 GPR119Q8TDV5 335 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ADAMTS17Q8TE56 1095 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TMEM203Q969S6 136 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 INTS12Q96CB8 462 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 LGALS12Q96DT0 336 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ABHD17AQ96GS6 310 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 COG8Q96MW5 612 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 GPA33Q99795 319 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 USB1Q9BQ65 265 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ENKD1Q9H0I2 346 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ENPP5Q9UJA9 477 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CHST2Q9Y4C5 530 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 A0A087WV48 116 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 A0A1B0GUH1 482 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 HSPB2A8KAH6 182 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 FADS1O60427 444 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 PTHP01270 115 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 IMPDH2P12268 514 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ZNF182P17025 639 aaPredicted RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 FUT4P22083 530 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 HSPB2Q16082 182 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 DESI1Q6ICB0 168 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ANKRD13BQ86YJ7 626 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ZNF441Q8N8Z8 693 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 OR52I1Q8NGK6 324 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 OR8D4Q8NGM9 314 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 OR6N2Q8NGY6 317 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 APH1BQ8WW43 257 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 APH1AQ96BI3 265 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 RHNO1Q9BSD3 238 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 SLITRK2Q9H156 845 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TPK1Q9H3S4 243 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 SH3BGRL2Q9UJC5 107 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 FBXL3Q9UKT7 428 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CLDN16Q9Y5I7 305 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TMEM14AQ9Y6G1 99 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 OIP5O43482 229 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CXCL13O43927 109 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 SLC2A10O95528 541 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CLDN15P56746 228 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 PCBD1P61457 104 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ACTA2P62736 377 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ACTG2P63267 376 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ROR2Q01974 943 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 DCTN2Q13561 401 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 ZNF74Q16587 644 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 RPUSD3Q6P087 351 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 PLEKHG7Q6ZR37 379 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TMPPEQ6ZT21 453 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ATG4DQ86TL0 474 aaPredicted RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 CCDC71Q8IV32 467 aaPredicted RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 TMEM251Q8N6I4 163 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 THEM6Q8WUY1 208 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 S100ZQ8WXG8 99 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 HOXB13Q92826 284 aaPredicted RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 Q96M85 177 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TRIB1Q96RU8 372 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 NMNAT3Q96T66 252 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ALG8Q9BVK2 526 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 CDCA4Q9BXL8 241 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 INPP5EQ9NRR6 644 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TAS2R16Q9NYV7 291 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 LAMP5Q9UJQ1 280 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ZMIZ1Q9ULJ6 1067 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 ICAM5Q9UMF0 924 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TRAPPC4Q9Y296 219 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 SPEF1Q9Y4P9 236 aa6.54□□□□□ -1.36
LSM8-204ENST00000424702 TNRC6BQ9UPQ9 1833 aaKnown RBP6.54□□□□□ -1.36
LSM8-204ENST00000424702 MED19A0JLT2 244 aaPredicted RBP6.53□□□□□ -1.36
LSM8-204ENST00000424702 AHRRA9YTQ3 701 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 PHYHO14832 338 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 OPN1LWP04000 364 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 GADD45AP24522 165 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 RASGEF1BQ0VAM2 473 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 SPANXN2Q5MJ10 180 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
LSM8-204ENST00000424702 UBE2UQ5VVX9 321 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 H3F3CQ6NXT2 135 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 DPPA2Q7Z7J5 298 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 KLBQ86Z14 1044 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 LRRC17Q8N6Y2 441 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 AP3S1Q92572 193 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 MUCL1Q96DR8 90 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 KCTD7Q96MP8 289 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 OXGR1Q96P68 337 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 REPIN1Q9BWE0 567 aaKnown RBP6.53□□□□□ -1.36
LSM8-204ENST00000424702 ULBP2Q9BZM5 246 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 OR11A1Q9GZK7 315 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 SLC6A15Q9H2J7 730 aa6.53□□□□□ -1.36
LSM8-204ENST00000424702 MEPEQ9NQ76 525 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms