RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SIGIRRQ6IA17 410 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PWWP2BQ6NUJ5 590 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 OVCH1Q7RTY7 1134 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 FGD2Q7Z6J4 655 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 LSMEM1Q8N8F7 131 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PMEPA1Q969W9 287 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 TOE1Q96GM8 510 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 LPAR4Q99677 370 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 FBXL21Q9UKT6 434 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 CDV3Q9UKY7 258 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 MRPS33Q9Y291 106 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 FXYD6-FXYD2A0A087WZ82 144 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 TACR3P29371 465 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 RBM34P42696 430 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 TAS2R20P59543 309 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 RPL18Q07020 188 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 CBFBQ13951 182 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 OR6V1Q8N148 313 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PLPP7Q8NBV4 271 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SLC2A12Q8TD20 617 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 NKD1Q969G9 470 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SLITRK2Q9H156 845 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 B3GNT2Q9NY97 397 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 RDH8Q9NYR8 311 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 ICAM5Q9UMF0 924 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 TICRRQ7Z2Z1 1910 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 EML5Q05BV3 1969 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 CD53P19397 219 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PTH2RP49190 550 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 ART1P52961 327 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 MELKQ14680 651 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 ETFDHQ16134 617 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 C11orf88Q6PI97 169 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 TTLL10Q6ZVT0 673 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 OR5M1Q8NGP8 315 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 COQ8AQ8NI60 647 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 RBP7Q96R05 134 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 FOXJ3Q9UPW0 622 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PYCARD-AS1I3L0S3 204 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 PDGFAP04085 211 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 RAB14P61106 215 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 PUDPQ08623 228 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 HTR4Q13639 388 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 ALKBH1Q13686 389 aaKnown RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 EXOSC6Q5RKV6 272 aaKnown RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF782Q6ZMW2 699 aaPredicted RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 SLC35F3Q8IY50 421 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 G6PC3Q9BUM1 346 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 UBQLN2Q9UHD9 624 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 SCP2D1Q9UJQ7 156 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 ATXN7L1Q9ULK2 861 aaPredicted RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 TRAV18A0A075B6X5 111 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 SCDO00767 359 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 CDC40O60508 579 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 SPARCP09486 303 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 UBL4AP11441 157 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 MST1P26927 711 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 UBE2IP63279 158 aaKnown RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 ZP2Q05996 745 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 BIKQ13323 160 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 C2orf68Q2NKX9 166 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 MESTQ5EB52 335 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 OR7E24Q6IFN5 339 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 MICU1Q9BPX6 476 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 LMF2Q9BU23 707 aaKnown RBP10.81□□□□□ -0.68
LIMK1-202ENST00000418310 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 CD207Q9UJ71 328 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 FREM3P0C091 2139 aa10.81□□□□□ -0.68
LIMK1-202ENST00000418310 L7N2F9 121 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 PDCD5O14737 125 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 CTNSO60931 367 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 HIST1H2ABP04908 130 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 CD14P08571 375 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 MYF5P13349 255 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 GPR3P46089 330 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF74Q16587 644 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 Q499Y3 187 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 PXDC1Q5TGL8 231 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 OR10K2Q6IF99 312 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 C16orf47Q6ZP98 133 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-202ENST00000418310 HIST3H2AQ7L7L0 130 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 TMED4Q7Z7H5 227 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 THAP3Q8WTV1 239 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-202ENST00000418310 HIST1H2ACQ93077 130 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 SEMA6CQ9H3T2 930 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 ABCA7Q8IZY2 2146 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 G3V3Q6 166 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 GABARAPH6UMI1 98 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 POU2F2P09086 479 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 EGR4Q05215 589 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 C19orf57Q0VDD7 668 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 ZMYND11Q15326 602 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 LINC00114Q6XXX2 140 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 MARCH3Q86UD3 253 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 TEX19Q8NA77 164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms