RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CCNB1P14635 433 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 AADACP22760 399 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR3A3P47888 321 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 BIDP55957 195 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 LINC01547P58512 204 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 RUNX3Q13761 415 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MEF2DQ14814 521 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 SNRNP35Q16560 246 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 SGCAQ16586 387 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 Q3ZCU0 254 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 SFT2D3Q587I9 215 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CT45A2Q5DJT8 189 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 C6orf226Q5I0X4 101 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PXDC1Q5TGL8 231 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TRNP1Q6NT89 227 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 FAM122CQ6P4D5 195 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TGIF2LXQ8IUE1 241 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GPD1LQ8N335 351 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MTURNQ8N3F0 131 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 METTL13Q8N6R0 699 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CSNK1A1LQ8N752 337 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 STPG4Q8N801 248 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GATSQ8NAP1 163 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR5AU1Q8NGC0 362 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR9Q2Q8NGE9 314 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR52I1Q8NGK6 324 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 FCAMRQ8WWV6 532 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CCDC127Q96BQ5 260 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ATXN7L3BQ96GX2 97 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 IL17FQ96PD4 163 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TMEM246Q9BRR3 403 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TMEM185BQ9H7F4 350 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TMEM165Q9HC07 324 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TREM1Q9NP99 234 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 UFSP2Q9NUQ7 469 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 IMP3Q9NV31 184 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 PAK1IP1Q9NWT1 392 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 BFARQ9NZS9 450 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 DCDC2Q9UHG0 476 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PIGLQ9Y2B2 252 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 BZW2Q9Y6E2 419 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ANKRD17O75179 2603 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 CHD5Q8TDI0 1954 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MN1Q10571 1320 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 IGHV1OR15-9A0A0B4J2B8 117 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 H3BTX0 84 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TULP2O00295 520 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NR5A2O00482 541 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 POLR1CO15160 346 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ATP6V0E1O15342 81 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TPST2O60704 377 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CDK14O94921 469 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CRYAAP02489 173 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 FTH1P02794 183 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GP1BAP07359 652 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PLEKP08567 350 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 HSMCR30P0CW71 290 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 POLR2EP19388 210 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 EFNA1P20827 205 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 PTNP21246 168 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 EDNRAP25101 427 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CD1BP29016 333 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 HOXD3P31249 432 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ARL2P36404 184 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ACVR1BP36896 505 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ALDH3B1P43353 468 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GCLMP48507 274 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CLDN18P56856 261 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 Q0VFX4 171 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MERTKQ12866 999 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZNF177Q13360 481 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 HNRNPA1L2Q32P51 320 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 CNPY1Q3B7I2 92 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ACTBL2Q562R1 376 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MBOAT1Q6ZNC8 495 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TRPT1Q86TN4 253 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 PIGZQ86VD9 579 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 Q8N9G6 341 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 C8orf31Q8N9H6 132 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR4C5Q8NGB2 326 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NDNFQ8TB73 568 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 SORCS1Q8WY21 1168 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CERS2Q96G23 380 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NOL4LQ96MY1 436 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ALS2CR12Q96Q35 445 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NAPGQ99747 312 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 GABRG3Q99928 467 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PAIP2Q9BPZ3 127 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 RNF167Q9H6Y7 350 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ELL3Q9HB65 397 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 RETNQ9HD89 108 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 RNF7Q9UBF6 113 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 DNAJC12Q9UKB3 198 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 EP300Q09472 2414 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 IGHV4OR15-8A0A075B7B6 117 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 P2RY10O00398 339 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CNOT3O75175 753 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 CDK2AP2O75956 126 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ACTL6AO96019 429 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms