RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 OR4A15Q8NGL6 344 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 MIPOL1Q8TD10 442 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 CNOT9Q92600 299 aaKnown RBP8.22□□□□□ -1.09
RFFL-203ENST00000413582 PMM1Q92871 262 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 MRPL24Q96A35 216 aaKnown RBP8.22□□□□□ -1.09
RFFL-203ENST00000413582 MCUR1Q96AQ8 359 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 PANX1Q96RD7 426 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 CGREF1Q99674 301 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 SLC6A7Q99884 636 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 SUCNR1Q9BXA5 334 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 PAIP1Q9H074 479 aaKnown RBP8.22□□□□□ -1.09
RFFL-203ENST00000413582 OR51I1Q9H343 314 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 NOX3Q9HBY0 568 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 SPAG4Q9NPE6 437 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 G6PC2Q9NQR9 355 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 EXD2Q9NVH0 621 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 TREM2Q9NZC2 230 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 ABCD2Q9UBJ2 740 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 CORO2BQ9UQ03 480 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 WDR45Q9Y484 360 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 CMYA5Q8N3K9 4069 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
RFFL-203ENST00000413582 VSTM5A8MXK1 200 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 M0R233 179 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 FXYD1O00168 92 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SYNGR3O43761 229 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 ANP32DO95626 131 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 CPSF4O95639 269 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 C1QCP02747 245 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 GPIP06744 558 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 OR12D1P0DN82 309 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 NQO1P15559 274 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 CBR1P16152 277 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 HOXB9P17482 250 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 ACHEP22303 614 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SLC6A2P23975 617 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 MAP2K6P52564 334 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SH3BGRP55822 239 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 UBA52P62987 128 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 KCNJ10P78508 379 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 ROR2Q01974 943 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 NPRL3Q12980 569 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 CEACAM7Q14002 265 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 DAG1Q14118 895 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 OR7A5Q15622 319 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 MIDNQ504T8 468 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 RUNDC3AQ59EK9 446 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SAMD4BQ5PRF9 694 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 C6orf10Q5SRN2 563 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 KRT80Q6KB66 452 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 NANOGP8Q6NSW7 305 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 FAHD2BQ6P2I3 314 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 NIPAL3Q6P499 406 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 TNFAIP8L2Q6P589 184 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 PGM2L1Q6PCE3 622 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SLC2A7Q6PXP3 512 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 TEX29Q8N6K0 151 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 LRRC17Q8N6Y2 441 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 RAB8BQ92930 207 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 YIPF5Q969M3 257 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 FAHD2AQ96GK7 314 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 SPATA9Q9BWV2 254 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 CADM1Q9BY67 442 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 MRPL37Q9BZE1 423 aaKnown RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 LINC00470Q9BZP3 86 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 RAD21L1Q9H4I0 556 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 NANOGQ9H9S0 305 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 ZNF275Q9NSD4 429 aaPredicted RBP8.21□□□□□ -1.1
RFFL-203ENST00000413582 SLC6A13Q9NSD5 602 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 CMAHPQ9Y471 501 aa8.21□□□□□ -1.1
RFFL-203ENST00000413582 PRAMEF27A3QJZ7 478 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 EVPLLA8MZ36 301 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 FAAHO00519 579 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 FRS3O43559 492 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 RP2O75695 350 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 NCR1O76036 304 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 KRT75O95678 551 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 AGR2O95994 175 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 HKR1P10072 659 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 HSD17B1P14061 328 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
RFFL-203ENST00000413582 UQCRC2P22695 453 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 NR4A1P22736 598 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 COL8A2P25067 703 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 EVX1P49640 407 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 EPS8Q12929 822 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 FOXL1Q12952 345 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 ATAD3BQ5T9A4 648 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 SAXO2Q658L1 398 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 ZNF621Q6ZSS3 439 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 CREB3L2Q70SY1 520 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 MDP1Q86V88 176 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 EPHX4Q8IUS5 362 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 SLC15A3Q8IY34 581 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 XAGE5Q8WWM1 108 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 RDH5Q92781 318 aa8.2□□□□□ -1.1
RFFL-203ENST00000413582 POP5Q969H6 163 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms