RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 MAPRE2Q15555 327 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 RPEL1Q2QD12 228 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 EOGTQ5NDL2 527 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 UTF1Q5T230 341 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 PRMT9Q6P2P2 845 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 FRRS1Q6ZNA5 592 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 Q6ZRP5 223 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 BHLHA15Q7RTS1 189 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 ABHD12BQ7Z5M8 362 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 SLC26A11Q86WA9 606 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 PLCZ1Q86YW0 608 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 SVOPLQ8N434 492 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 OR56B4Q8NH76 319 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 MRGPRDQ8TDS7 321 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 TFGQ92734 400 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 FGF11Q92914 225 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CMTM7Q96FZ5 175 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 MRPL45Q9BRJ2 306 aaKnown RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 TM2D1Q9BX74 207 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CLEC7AQ9BXN2 247 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 DEFB129Q9H1M3 183 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CWH43Q9H720 699 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 MOB1AQ9H8S9 216 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CAB39LQ9H9S4 337 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 NTN4Q9HB63 628 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CD209Q9NNX6 404 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 ABCC13Q9NSE7 274 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 HRASLS2Q9NWW9 162 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CLEC5AQ9NY25 188 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 B3GNT2Q9NY97 397 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 NKIRAS1Q9NYS0 192 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 MRM2Q9UI43 246 aaKnown RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 RCL1Q9Y2P8 373 aaKnown RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 L3MBTL1Q9Y468 752 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CPQQ9Y646 472 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CDH10Q9Y6N8 788 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CNTNAP1P78357 1384 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 JCADQ9P266 1359 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 GAKO14976 1311 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 A0A1W2PRF3 423 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 A0A1W2PRM7 423 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 BCLAF3A2AJT9 711 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 K7EQG2 157 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 DCTN6O00399 190 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 PLPP1O14494 284 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SLC9A3R1O14745 358 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 XRCC2O43543 280 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SNAI2O43623 268 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SCRG1O75711 98 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SC5DO75845 299 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 IGHG1P01857 330 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 AMBPP02760 352 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SERPINA5P05154 406 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 PSMB6P28072 239 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SNRPD1P62314 119 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 MRPS11P82912 194 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 PIGHQ14442 188 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 TRAM2Q15035 370 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 TRMT5Q32P41 509 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 C14orf28Q4W4Y0 310 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 PAN3Q58A45 887 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 RNLSQ5VYX0 342 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ANKRD26P1Q6NSI1 321 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 EMBQ6PCB8 327 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 TMPRSS11AQ6ZMR5 421 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 Q6ZSR9 355 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 OR2W3Q7Z3T1 314 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF547Q8IVP9 402 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SYS1Q8N2H4 156 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 OR2G2Q8NGZ5 317 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ZNF502Q8TBZ5 544 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ACOT11Q8WXI4 607 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 BAALCQ8WXS3 180 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 DNASE2BQ8WZ79 361 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ATXN7L3BQ96GX2 97 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 DUX3Q96PT4 197 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SORT1Q99523 831 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 MED10Q9BTT4 135 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 CHIAQ9BZP6 476 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 ACP6Q9NPH0 428 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 OR2S2Q9NQN1 319 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SDHAF3Q9NRP4 125 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.83
BRCA1-204ENST00000412061 TMEM181Q9P2C4 612 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SLC17A7Q9P2U7 560 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 CLEC2DQ9UHP7 191 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 SCML1Q9UN30 329 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 PPIL1Q9Y3C6 166 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.83
BRCA1-204ENST00000412061 AQRO60306 1485 aaKnown RBP eCLIP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 MGAT4DA6NG13 374 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 SLC22A20A6NK97 555 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 SMLR1H3BR10 107 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 MBTPS2O43462 519 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 EEDO75530 441 aaKnown RBP3.64□□□□□ -1.83
BRCA1-204ENST00000412061 IGHV2-5P01817 119 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 SERPINB2P05120 415 aa3.64□□□□□ -1.83
BRCA1-204ENST00000412061 KLK1P06870 262 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms